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Institution

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Albert-Ludwigs-Universität Freiburg
Institut für Informatik
Lehrstuhl für Bioinformatik

Address Georges-Köhler-Allee 106
79110 Freiburg
Deutschland

GERiT This institution in GERiT

79110 Freiburg

Projects

Priority Programmes
- Current projects
  - Early Determinants of Heterocyst Differentiation in Multicellular Cyanobacteria
    (Applicants Backofen, Rolf ; Hess, Wolfgang R. )
  - Inferring the nature of the most recent common ancestor of plants
    (Applicant Rensing, Stefan A. )
  - Ribosome Profiling and Bioinformatics
    (Applicants Backofen, Rolf ; Sharma, Cynthia Mira )
- Completed projects
Research Units
- Completed projects
  - Bioinformatic analyses of CRISPR elements
    (Applicant Backofen, Rolf )
Research Grants
- Current projects
  - Impact of RNA-binding proteins and mRNA structures on alternative mechanisms of translational regulation in inflammation-associated tumorigenesis
    (Applicants Backofen, Rolf ; Schmid, Tobias )
- Completed projects
  - A Flexible and Efficient System for the Detection of RNA Sequence/Structure Motifs
    (Applicant Backofen, Rolf )
  - ATP - Automated Intra-Annual Tree-Ring Profiling for Dendroecological Research
    (Applicants Backofen, Rolf ; Spiecker, Heinrich )
  - eCLASH Towards defining the small RNA interactome
    (Applicants Backofen, Rolf ; Pospisilik, Ph.D., John Andrew )
  - Extending the theory of Algebraic Dynamic Programming for applications in bioinformatics
    (Applicant Backofen, Rolf )
  - Prediction of RNA-RNA Interactions by Kinetic Modelling
    (Applicant Backofen, Rolf )
Major Research Instrumentation
- Completed projects
  - High-Performance Computing (HPC) Cluster
Collaborative Research Centres
- Current projects
  - An effective similarity integration multi-modal graph neural network method to facilitate disease gene prioritization
    (Project Heads Backofen, Rolf ; Schmidts, Miriam )
  - Enabling efficient and safe application of CRISPR-Cas in primary human cells by deep learning-based information transfer from well-investigated cell types
    (Project Heads Backofen, Rolf ; Cathomen, Toni )
  - Integrated research training group
    (Project Heads Backofen, Rolf ; Binder, Nadine )
  - Sequencing and Bioinformatics
    (Project Heads Backofen, Rolf ; Gilsbach, Ralf ; Hein, Lutz ; Preißl, Sebastian )
- Completed projects
  - Alternative Splicing as a Modulator of Signal Transduction
    (Project Heads Backofen, Rolf ; Platzer, Matthias )
  - Deep-Sequencing / Bioinformatics
    (Project Heads Backofen, Rolf ; Manke, Thomas )
CRC/Transregios
- Current projects
  - Bioinformatics core
    (Project Heads Backofen, Rolf ; Börries, Melanie )
Research Training Groups
- Current projects
  - GRK 2344: MeInBio - BioInMe: Exploration of spatio-temporal dynamics of gene regulation using high-throughput and high-resolution methods
    (Spokesperson Vogel, Tanja )
NFDI technical and methodological consortia
- Current projects
  - DataPLANT – Data in PLANT research
    (Spokesperson von Suchodoletz, Dirk )
  - NFDI4BIOIMAGE - National research data infrastructure for microscopy and bioimage analysis
    (Spokesperson Weidtkamp-Peters, Stefanie )

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