SPP 1648:  Software for Exascale Computing

• Subject Area: Computer Science, Systems and Electrical Engineering ; Biology ; Geosciences ; Mechanical and Industrial Engineering ; Mathematics ; Physics ; Thermal Engineering/Process Engineering
• Term: from 2012 to 2019
• Project identifier: Deutsche Forschungsgemeinschaft (DFG) - Project number 214420555

• Final Report Year: 2020

No abstract available

Publications

• Using automated performance modeling to find scalability bugs in complex codes. In: Proceedings of the International Conference on High Performance Computing, Networking, Storage and Analysis, p. 45. IEEE, Piscataway (2013)
  Calotoiu, Alexandru; Hoefler, Torsten; Poke, Marius & Wolf, Felix
  
• DASH: data structures and algorithms with support for hierarchical locality. In: European Conference on Parallel Processing, pp. 542–552. Springer, Berlin (2014)
  Fürlinger, Karl; Glass, Colin; Gracia, Jose; Knüpfer, Andreas; Tao, Jie; Hünich, Denis; Idrees, Kamran; Maiterth, Matthias; Mhedheb, Yousri & Zhou, Huan
  
• EXA-DUNE: flexible PDE solvers, numerical methods and applications. In: European Conference on Parallel Processing, pp. 530–541. Springer, Berlin (2014)
  Bastian, Peter; Engwer, Christian; Göddeke, Dominik; Iliev, Oleg; Ippisch, Olaf; Ohlberger, Mario; Turek, Stefan; Fahlke, Jorrit; Kaulmann, Sven; Müthing, Steffen & Ribbrock, Dirk
  
• Increasing the performance of the Jacobi–Davidson method by blocking. SIAM J. Sci. Comput. 37(6), C697–C722 (2015)
  Röhrig-Zöllner, Melven; Thies, Jonas; Kreutzer, Moritz; Alvermann, Andreas; Pieper, Andreas; Basermann, Achim; Hager, Georg; Wellein, Gerhard & Fehske, Holger
  
• Portable node-level performance optimization for the fast multipole method. In: Recent Trends in Computational Engineering-CE2014, pp. 29–46. Springer, Berlin (2015)
  Beckmann, Andreas & Kabadshow, Ivo
  
• Global communication schemes for the numerical solution of high-dimensional PDEs. Parallel Comput. 52, 78–105 (2016)
  Hupp, Philipp; Heene, Mario; Jacob, Riko & Pflüger, Dirk
  
• High-performance implementation of Chebyshev filter diagonalization for interior eigenvalue computations. J. Comput. Phys. 325, 226– 243 (2016)
  Pieper, Andreas; Kreutzer, Moritz; Alvermann, Andreas; Galgon, Martin; Fehske, Holger; Hager, Georg; Lang, Bruno & Wellein, Gerhard
  
• Parallel coupling numerics for partitioned fluid–structure interaction simulations. Comput. Math. Appl. 71(4), 869–891 (2016)
  Mehl, Miriam; Uekermann, Benjamin; Bijl, Hester; Blom, David; Gatzhammer, Bernhard & van Zuijlen, Alexander
  
• Resilience for massively parallel multigrid solvers. SIAM J. Sci. Comput. 38(5), S217–S239 (2016)
  Huber, Markus; Gmeiner, Björn; Rüde, Ulrich & Wohlmuth, Barbara
  
• A highly scalable, algorithm-based fault-tolerant solver for gyrokinetic plasma simulations. In: Proceedings of the 8th Workshop on Latest Advances in Scalable Algorithms for Large-Scale Systems, pp. 1–8 (2017)
  Obersteiner, Michael; Hinojosa, Alfredo Parra; Heene, Mario; Bungartz, Hans-Joachim & Pflüger, Dirk
  
• A scala prototype to generate multigrid solver implementations for different problems and target multi-core platforms. Int. J. Comput. Sci. Eng. 14(2), 150–163 (2017)
  Köstler, Harald; Schmitt, Christian; Kuckuk, Sebastian; Kronawitter, Stefan; Hannig, Frank; Teich, Jürgen; Rüde, Ulrich & Lengauer, Christian
  
• Isoefficiency in practice: configuring and understanding the performance of task-based applications. In: ACM SIGPLAN Notices, vol. 52, pp. 131–143. ACM, New York (2017)
  Shudler, Sergei; Calotoiu, Alexandru; Hoefler, Torsten & Wolf, Felix
  
• Time-parallel gravitational collapse simulation. Commun. Appl. Math. Comput. Sci. 12(1), 109–128 (2015)
  Kreienbuehl, Andreas; Benedusi, Pietro; Ruprecht, Daniel & Krause, Rolf
  
• Toward decoupling the selection of compression algorithms from quality constraints. In: International Conference on High Performance Computing, pp. 3–14. Springer, Berlin (2017)
  Kunkel, Julian; Novikova, Anastasiia; Betke, Eugen & Schaare, Armin
  
• A high-level C++ approach to manage local errors, asynchrony and faults in an MPI application. In: 2018 26th Euromicro International Conference on Parallel, Distributed and Network-based Processing (PDP), pp. 714–721. IEEE, Piscataway (2018)
  Engwer, Christian; Altenbernd, Mirco; Dreier, Nils-Arne & Goddeke, Dominik
  
• Automating the development of high-performance multigrid solvers. Proc. IEEE 106(11), 1969– 1984 (2018)
  Schmitt, Christian; Kronawitter, Stefan; Hannig, Frank; Teich, Jurgen & Lengauer, Christian
  
• Efficiency of high-performance discontinuous Galerkin spectral element methods for under-resolved turbulent incompressible flows. Int. J. Numer. Methods Fluids 88(1), 32–54 (2018)
  Fehn, Niklas; Wall, Wolfgang A. & Kronbichler, Martin
  
• GekkoFS—a temporary distributed file system for HPC applications. In: 2018 IEEE International Conference on Cluster Computing (CLUS- TER), pp. 319–324. IEEE, Piscataway (2018)
  Vef, Marc-Andre; Moti, Nafiseh; SuB, Tim; Tocci, Tommaso; Nou, Ramon; Miranda, Alberto; Cortes, Toni & Brinkmann, Andre
  
• Performance portability of earth system models with user-controlled GGDML code translation. In: International Conference on High Performance Computing, pp. 693–710. Springer, Berlin (2018)
  Jum’ah, Nabeeh & Kunkel, Julian
  
• Space-time FE-DG Discretization of the anisotropic diffusion equation in any dimension: the spectral symbol. SIAM J. Matrix Anal. Appl. 39(3), 1383–1420 (2018)
  Benedusi, Pietro; Garoni, Carlo; Krause, Rolf; Li, Xiaozhou & Serra-Capizzano, Stefano
  
• Thread-local concurrency: a technique to handle data race detection at programming model abstraction. In: Proceedings of the 27th International Symposium on High-Performance Parallel and Distributed Computing, pp. 144–155 (2018)
  Protze, Joachim; Schulz, Martin; Ahn, Dong H. & Müller, Matthias S.
  
• A new load balancing approach for coupled multi-physics simulations. In: 2019 IEEE International Parallel and Distributed Processing Symposium Workshops (IPDPSW), pp. 676–682. IEEE, Piscataway (2019)
  Totounferoush, Amin; Ebrahimi Pour, Neda; Schroder, Juri; Roller, Sabine & Mehl, Miriam
  
• Engineering a distributed histogram sort. In: 2019 IEEE International Conference on Cluster Computing (CLUSTER), pp. 1–11. IEEE, Piscataway (2019)
  Kowalewski, Roger; Jungblut, Pascal & Furlinger, Karl
  
• Fast matrix-free evaluation of discontinuous Galerkin finite element operators. ACM Trans. Math. Softw. 45(3), 1–40 (2019)
  Kronbichler, Martin & Kormann, Katharina
  
• FFMK: an HPC OS based on the L4Re microkernel. In: Operating Systems for Supercomputers and High Performance Computing, pp. 335–357. Springer, Berlin (2019)
  Weinhold, Carsten; Lackorzynski, Adam & Härtig, Hermann
  
• Large-scale simulation of mantle convection based on a new matrix-free approach. J. Comput. Sci. 31, 60–76 (2019)
  Bauer, S.; Huber, M.; Ghelichkhan, S.; Mohr, M.; Rüde, U. & Wohlmuth, B.
  
• More bang for your buck: Improved use of GPU nodes for GROMACS 2018. J. comput. chem. 40(27), 2418–2431 (2019)
  Kutzner, Carsten; Páll, Szilárd; Fechner, Martin; Esztermann, Ansgar; de Groot, Bert L. & Grubmüller, Helmut
  
• Multilevel checkpoint/restart for large computational jobs on distributed computing resources. In: IEEE 38th Symposium on Reliable Distributed System (SRDS) (2019)
  Gholami Estahbanati, Masoud & Schintke, Florian
  
• On the quality of wall time estimates for resource allocation prediction. In: Proceedings of the 48th International Conference on Parallel Processing: Workshops, pp. 1–8. ACM, New York (2019)
  Soysal, Mehmet; Berghoff, Marco; Klusáček, Dalibor & Streit, Achim
  
• Myx—runtime correctness analysis for multi-level parallel programming paradigms. In: Software for Exascale Computing: SPPEXA 2016– 2019. Lecture Notes in Computational Science and Engineering. Springer, Berlin (2020)
  Protze, Joachim; Tsuji, Miwako; Terboven, Christian; Dufaud, Thomas; Murai, Hitoshi; Petiton, Serge; Emad, Nahid; Müller, Matthias S. & Boku, Taisuke