Development of integrated continuous flow systems for transient transfection, cultivation and monitoring of mammalian cells
Final Report Abstract
The benefits of continuous cultivation and production processes have been widely demonstrated by a variety of biopharmaceutical industries in recent years. With the increasing demand for biopharmaceuticals, higher productivity and ever-increasing pressure to reduce manufacturing costs, the biotech industry is showing a continued interest in the development of continuous production systems. Although there are emerging continuous bioprocess technologies on the market, there are almost no actual examples of successful implementation of a fully continuous process for biological products. To accelerate process optimization, it is beneficial to implement the bioreactor with appropriate sensors and technologies for continuous monitoring and control of critical cultivation parameters. In addition, the market is looking for technologies that enable flexible production of individual target proteins and parallelization of production processes. To further advance these development processes, this project proposed the development of an innovative, controlled and continuous cell transfection and cultivation system for recombinant protein production and simultaneous monitoring (e.g., of product and contamination) by integrating various functional microfluidic lab-on-a-chip (LOC) systems. LOC systems offer many advantages for bioprocesses, such as low sample volume, defined and reproducible working conditions, portability, point-of-use diagnostics and the potential to reduce process costs. The main challenges for continuous bioreactor cultivation are the development and integration of functional units and monitoring systems that are suitable for both upstream and downstream processes. Therefore, the focus of this project was on the development of microfluidic systems and novel biosensors that can be integrated directly into a bioprocess. As an important part of the upstream process, a LOC system for continuous and controlled transient gene transfer into host cells was developed and used directly in the cell culture process within this project, enabling flexible production of recombinant proteins. In addition, novel photonic silicon-based and aptamer-based biosensors were developed that can be used for rapid monitoring of target proteins and early detection of potential microbial contamination in cell culture systems. Some of the biosensors developed have also been successfully used for biomarker detection in the field of point-of-care diagnostics. The results of this research project successfully demonstrated the great potential of high-resolution 3D printing technology using biocompatible materials for flexible system development, system miniaturization and integration as well as for individual applications in the field of bioprocess and cell culture technology.
Publications
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Electromechanical Detection of Pathogens with Self-Assembled Aptamer Biosensors, Batsheva de Rothschild Seminar on New Concept in Biosensing, Dead Sea, Israel (2017) (Oral Presentation)
J Bahnemann; L M Kasmaee; Z Chikneyan; X Xie & M R Hoffmann
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3D Printed Microfluidic Mixers—A Comparative Study on Mixing Unit Performances. Small, 15(2).
Enders, Anton; Siller, Ina G.; Urmann, Katharina; Hoffmann, Michael R. & Bahnemann, Janina
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Biocompatibility Studies of 3D-printed Microfluidics, Lab-on-a-Chip & Microfluidics EUROPE 2018, Rotterdam, The Netherlands (2018); (Best Poster Award)
I G Siller; A Enders; T Steinwedel; J-A Preuß & J Bahnemann
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Electromechanical Detection of Pathogens with Self-Assembled Nucleic Acid Biosensors; TechConnect Briefs 2, 153-156, (2018) ISBN: 978-0-9975117-9-6
K. Urmann; J. Bahnemann; Z. Chikneyan; L. M. Kasmaee & M. R. Hoffmann
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3D-gedruckte Mikrofluidische Systeme, Panel: Medizintechnik und Implantatentwicklung, Labvolution, Hannover (2019); (Invited Speaker)
J Bahnemann
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A continuous system for pharmaceutical processing. EU Research Summer / Autumn 2019, Blazon Publishing and Media Ltd, 16-17: 2019-08-08 (2019)
J Bahnemann
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Integration of porous silicon-based optical aptasensors in a 3D-printed microfluidic platform for protein detection. Conference Paper, 23rd International Conference on Miniaturized Systems for Chemistry and Life Sciences, µTAS (2019); (Conference Paper)
S Arshavsky-Graham; N-M Epping; A Enders; T Scheper; J Bahnemann & E Segal
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Rapid prototyping enables flexible process development via 3D-printed µ-bubble column reactor for biotechnological application, DECHEMA „Himmelfahrtstagung 2019“, Hamburg (2019); (Best Poster Award)
D Vorländer; L Frey; H Ostsieker; J-L Lohse; D Rasch; J-H Grosch; R Krull & J Bahnemann
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Real-Time Live-Cell Imaging Technology Enables High-Throughput Screening to Verify in Vitro Biocompatibility of 3D Printed Materials. Materials, 12(13), 2125.
Siller, Ina G.; Enders, Anton; Steinwedel, Tobias; Epping, Niklas-Maximilian; Kirsch, Marline; Lavrentieva, Antonina; Scheper, Thomas & Bahnemann, Janina
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Rechte und Pflichten von akademischen Nachwuchsführungskräften. Positionspapier: Stellungnahme des Zukunftsforums Biotechnologie der DECHEMA e.V. (2019)
F Harnisch; J Bahnemann; J Buyel; F Centler; T Classen; K Dohnt; B E Ebert; K Eyer; A Grünberger; U Jandt; S Jung; S Kara; F Krujatz; H Link; L Regenstein; J Schmid & D Tischler
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3D-Printed Flow Cells for Aptamer-Based Impedimetric Detection of E. coli Crooks Strain. Sensors, 20(16), 4421.
Siller, Ina G.; Preuss, John-Alexander; Urmann, Katharina; Hoffmann, Michael R.; Scheper, Thomas & Bahnemann, Janina
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3D-printed Microfluidic Systems for Cell Culture and Biotechnological Applications 3rd International Conference on Industrial Biotechnology and Bioprocessing, Paris, France (2020) (Invited Speaker)
I G Siller & J Bahnemann
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Characterization of a customized 3D-printed cell culture system using clear, translucent acrylate that enables optical online monitoring. Biomedical Materials, 15(5), 055007.
Siller, Ina Gerhild; Enders, Anton; Gellermann, Pia; Winkler, Steffen; Lavrentieva, Antonina; Scheper, Thomas & Bahnemann, Janina
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Customizable 3D-Printed (Co-)Cultivation Systems for In Vitro Study of Angiogenesis. Materials, 13(19), 4290.
Siller, Ina G.; Epping, Niklas-Maximilian; Lavrentieva, Antonina; Scheper, Thomas & Bahnemann, Janina
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Fabrication of Stiffness Gradients of GelMA Hydrogels Using a 3D Printed Micromixer. Macromolecular Bioscience, 20(7).
Lavrentieva, Antonina; Fleischhammer, Tabea; Enders, Anton; Pirmahboub, Hamidreza; Bahnemann, Janina & Pepelanova, Iliyana
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Impedimetric Aptamer-Based Biosensors: Applications. Advances in Biochemical Engineering/Biotechnology, 43-91.
Preuß, John-Alexander; Reich, Peggy; Bahner, Nicole & Bahnemann, Janina
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Impedimetric Aptamer-Based Biosensors: Principles and Techniques. Advances in Biochemical Engineering/Biotechnology, 17-41.
Reich, Peggy; Preuß, John-Alexander; Bahner, Nicole & Bahnemann, Janina
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Integration of optical manipulation in 3D printed microfluidic devices (Conference Presentation). Biomedical Spectroscopy, Microscopy, and Imaging, 32.
Wang, Haoran; Enders, Anton; Heisterkamp, Alexander; Bahnemann, Janina & Torres-Mapa, Maria Leilani
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Miniaturized free‐flow electrophoresis: production, optimization, and application using 3D printing technology. ELECTROPHORESIS, 42(3), 305-314.
Preuss, John‐Alexander; Nguyen, Gia Nam; Berk, Virginia & Bahnemann, Janina
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Novel 3D-printed disease-on-a-chip for axonal infection by neuroinvasive viruses; EUROoCS Online Conference, Sweden (2020); (Oral Presentation)
S Winkler; S Nowack; K Kropp; A Viejo-Borbolla & J Bahnemann
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Spezielle labortechnische Reaktoren: Lab-on-a-Chip. Springer Reference Naturwissenschaften, 1391-1418.
Bahnemann, Janina; Stahl, Frank & Scheper, Thomas
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3D printed microfluidic lab-on-a-chip device for fiber-based dual beam optical manipulation. Scientific Reports, 11(1)
Wang, Haoran; Enders, Anton; Preuss, John-Alexander; Bahnemann, Janina; Heisterkamp, Alexander & Torres-Mapa, Maria Leilani
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3D Printed Microfluidic Spiral Separation Device for Continuous, Pulsation-Free and Controllable CHO Cell Retention. Micromachines, 12(9), 1060.
Enders, Anton; Preuss, John-Alexander & Bahnemann, Janina
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3D printing in biotechnology—An insight into miniaturized and microfluidic systems for applications from cell culture to bioanalytics. Engineering in Life Sciences, 22(12), 744-759.
Heuer, Christopher; Preuß, John‐Alexander; Habib, Taieb; Enders, Anton & Bahnemann, Janina
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3D-printed micro bubble column reactor with integrated microsensors for biotechnological applications: From design to evaluation. Scientific Reports, 11(1).
Frey, Lasse Jannis; Vorländer, David; Ostsieker, Hendrik; Rasch, Detlev; Lohse, Jan-Luca; Breitfeld, Maximilian; Grosch, Jan-Hendrik; Wehinger, Gregor D.; Bahnemann, Janina & Krull, Rainer
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3D-printed microfluidics integrated with optical nanostructured porous aptasensors for protein detection. Microchimica Acta, 188(3).
Arshavsky-Graham, Sofia; Enders, Anton; Ackerman, Shanny; Bahnemann, Janina & Segal, Ester
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3D‐Druck miniaturisierter und mikrofluidischer Systeme. Chemie in unserer Zeit, 56(5), 286-296.
Enders, Anton & Bahnemann, Janina
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Microfluidic Devices as Process Development Tools for Cellular Therapy Manufacturing. Advances in Biochemical Engineering/Biotechnology, 101-127.
Aranda Hernandez, Jorge; Heuer, Christopher; Bahnemann, Janina & Szita, Nicolas
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Microfluidic Systems and Organ (Human) on a Chip. Learning Materials in Biosciences, 175-200.
Bahnemann, Janina; Enders, Anton & Winkler, Steffen
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Microfluidics in Biotechnology: Quo Vadis. Advances in Biochemical Engineering/Biotechnology, 355-380.
Winkler, Steffen; Grünberger, Alexander & Bahnemann, Janina
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Monitoring cell productivity for the production of recombinant proteins by flow cytometry: An effective application using the cold capture assay. Engineering in Life Sciences, 21(5), 288-293.
Meyer, Katharina V.; Siller, Ina G.; Schellenberg, Jana; Gonzalez, Salcedo Alina; Solle, Dörte; Matuszczyk, Jens; Scheper, Thomas & Bahnemann, Janina
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Paving the Way to Overcome Antifungal Drug Resistance: Current Practices and Novel Developments for Rapid and Reliable Antifungal Susceptibility Testing. Small Methods, 5(11).
Heuer, Christopher; Bahnemann, Janina; Scheper, Thomas & Segal, Ester
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3D-Printed microfluidic device for protein purification in batch chromatography. Lab on a Chip, 22(5), 986-993.
Habib, Taieb; Brämer, Chantal; Heuer, Christopher; Ebbecke, Jan; Beutel, Sascha & Bahnemann, Janina
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3D‐printed autoclavable plant holders to facilitate large‐scale protein production in plants. Engineering in Life Sciences, 22(12), 803-810.
Chuang, Ling; Enders, Anton; Offermann, Sascha; Bahnemann, Janina & Franke, Jakob
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A 3D-printed microfluidic gradient generator with integrated photonic silicon sensors for rapid antimicrobial susceptibility testing. Lab on a Chip, 22(24), 4950-4961.
Heuer, Christopher; Preuss, John-Alexander; Buttkewitz, Marc; Scheper, Thomas; Segal, Ester & Bahnemann, Janina
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Automation of cell culture assays using a 3D-printed servomotor-controlled microfluidic valve system. Lab on a Chip, 22(23), 4656-4665.
Winkler, Steffen; Menke, Jannik; Meyer, Katharina V.; Kortmann, Carlotta & Bahnemann, Janina
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Invitro biocompatibility evaluation of a heat‐resistant 3D printing material for use in customized cell culture devices. Engineering in Life Sciences, 22(11), 699-708.
Winkler, Steffen; Meyer, Katharina V.; Heuer, Christopher; Kortmann, Carlotta; Dehne, Michaela & Bahnemann, Janina
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Microfluidics in Biotechnology. Advances in Biochemical Engineering/Biotechnology. Springer International Publishing.
Bahnemann, Janina & Grünberger, Alexander (Eds.)
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Microfluidics in Biotechnology: Overview and Status Quo. Advances in Biochemical Engineering/Biotechnology, 1-16.
Bahnemann, Janina & Grünberger, Alexander
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Stress‐induced increase of monoclonal antibody production in CHO cells. Engineering in Life Sciences, 22(5), 427-436.
Schellenberg, Jana; Nagraik, Tamanna; Wohlenberg, Ole Jacob; Ruhl, Sebastian; Bahnemann, Janina; Scheper, Thomas & Solle, Dörte
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Towards Small Scale: Overview and Applications of Microfluidics in Biotechnology. Molecular Biotechnology, 66(3), 365-377.
Enders, Anton; Grünberger, Alexander & Bahnemann, Janina
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3D-Druck zur Miniaturisierung von chromatographischen Anwendungen. BIOspektrum, 29(3), 276-277.
Kortmann, Carlotta; Habib, Taieb; Solle, Dörte & Bahnemann, Janina
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3D-Printed Microfluidic Perfusion System for Parallel Monitoring of Hydrogel-Embedded Cell Cultures. Cells, 12(14), 1816.
Meyer, Katharina V.; Winkler, Steffen; Lienig, Pascal; Dräger, Gerald & Bahnemann, Janina
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Apoptosis monitoring of Chinese Hamster Ovary cells using microfluidic isodielectrophoresis MicroTAS Conference, Katowice, Poland (2023)
J-A Preuss; R Rodriguez-Moncayo; J Voldman & J Bahnemann
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Development of a microfluidic System for continuous transient Transfection of Mammalian Cells; DECHEMA Himmelfahrtstagung on Bioprocess Engineering, Weimar (2023); (Oral Presentation)
M Dehne; A Enders & J Bahnemann
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Development of a Variable Microfluidic Sensor Platform for Online Process Monitoring of Miniaturized Bioreactors; DECHEMA Himmelfahrtstagung on Bioprocess Engineering, Weimar (2023); (Best Poster Award)
A Enders; M Klaßen; T Teutenberg & J Bahnemann
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Establishment of a Perfusion Process with Antibody-Producing CHO Cells Using a 3D-Printed Microfluidic Spiral Separator with Web-Based Flow Control. Bioengineering, 10(6), 656.
Schellenberg, Jana; Dehne, Michaela; Lange, Ferdinand; Scheper, Thomas; Solle, Dörte & Bahnemann, Janina
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Inertial Isolation of Leukocytes from Ultra-Low Volume Blood Samples obtained by Fingerstick; MicroTAS Conference, Katowice, Poland (2023); (Oral Presentation)
R Rodriguez-Moncayo; J-A Preuss; J Bahnemann; J Han & J Voldman
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Sensor integration into microfluidic systems: trends and challenges. Current Opinion in Biotechnology, 83, 102978.
Buttkewitz, Marc A.; Heuer, Christopher & Bahnemann, Janina
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A Novel 3D-Printed and Miniaturized Periodic Counter Current Chromatography System for Continuous Purification of Monoclonal Antibodies. Micromachines, 15(3), 382.
Kortmann, Carlotta; Habib, Taieb; Heuer, Christopher; Solle, Dörte & Bahnemann, Janina
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Editorial overview: Analytical Biotechnology: It's all about getting smaller. Current Opinion in Biotechnology, 85, 103029.
Grünberger, Alexander; Bahnemann, Janina & Dusny, Christian
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Microfluidic Transfection System and Temperature Strongly Influence the Efficiency of Transient Transfection. ACS Omega, 9(19), 21637-21646.
Dehne, Michaela; Neidinger, Simon Valentin; Stark, Michael; Adamo, Antonia Camilla; Kraus, Xenia; Färber, Nicolas; Westerhausen, Christoph & Bahnemann, Janina
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Photonic Si microwell architectures for rapid antifungal susceptibility determination of Candida auris. Chemical Communications, 60(10), 1305-1308.
Heuer, Christopher; Jiang, Xin; Ron, Gali; Ternyak, Orna; Scheper, Thomas; Bahnemann, Janina & Segal, Ester
