KatNat_Erforschung der vielfältigen Funktionen von Protein-Acetyltransferasen bei der pflanzlichen Stressantwort und der Regulation des Metabolismus.
Biochemie und Biophysik der Pflanzen
Zusammenfassung der Projektergebnisse
Plants have to coordinate their development and growth with a highly dynamic environment. They must constantly respond to a wide range of changes in environmental conditions, including stresses, such as high light, heat, drought, or salt in the soil. Such acclimation processes can be achieved through chemical modifications of proteins, allowing flexible and rapid changes in protein functions to alter cellular and physiological outputs. Protein acetylation is one such modification, which occurs on the N-termini (Nt) and internal lysine residues (K) of many proteins. Despite its prevalence, and in contrast to other well-studied modifications such as phosphorylation, our knowledge of: (i) the regulation, specificity, and plasticity of protein acetylation, and (ii) its downstream functional consequences on protein activity and physiology are severely lacking, especially in plants. This ERA-CAPS consortium focused on the multifaceted functions of protein acetylation in different sub-cellular compartments. The main aim of the KatNat project was to provide a mechanistic understanding of protein acetylation in plants, with a particular focus on investigating the enzymes that catalyze this modification (Nt- and K-acetyltransferases) and the resultant effects on proteostasis, photosynthesis, and metabolism. The KatNat project consisted of four interrelated objectives to shed new light on the questions: (1) How does abiotic stress regulate the global Nt- and K-acetylome?; (2) What are the specificities, targets and stress-responsive dynamics of the acetyltransferases?; (3) How does protein acetylation impact protein stability and turnover?; (4) How does protein acetylation in plastids regulate photosynthesis and metabolism? Important discoveries have been made in all four objectives. For the cytosolic acetyltransferases, we discovered that the Arabidopsis NAA50 enzyme displayed mainly N-terminal next to some residual lysine acetyltransferase activity. Defects in NAA50 expression resulted in severe growth retardation and infertility and caused the accumulation of proteins involved in stress responses. Similarly, loss-of-function mutants of the plasma membrane-anchored N-acetyltransferase NAA60 revealed its importance during high salt stress. In addition, we discovered a new family of plastid N-acetyltransferases, which consist out of eight members, which possess dual lysine and N-terminal acetylation activities (Bienvenut et al.2020 Mol Sys Biol). We identified the protein substrates of these enzymes and revealed that GNAT2 is required for photosynthetic state transitions in Arabidopsis. The here identified novel roles of the plant N-acetyltransferase machinery in development and stress responses changed the view on N-terminal acetylation in plastids and cytosol of plant cells. While the KatNat projects made important new discoveries in the field of protein acetylation research and its importance for plant acclimation responses, several new questions arose from our work, such as to what extend the plastid GNATs have redundant functions and how their activity is regulated. These new questions will need to be addressed in future research.
Projektbezogene Publikationen (Auswahl)
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NatB-Mediated N-Terminal Acetylation Affects Growth and Biotic Stress Responses. Plant Physiology, 182(2), 792-806.
Huber, Monika; Bienvenut, Willy V.; Linster, Eric; Stephan, Iwona; Armbruster, Laura; Sticht, Carsten; Layer, Dominik; Lapouge, Karine; Meinnel, Thierry; Sinning, Irmgard; Giglione, Carmela; Hell, Ruediger & Wirtz, Markus
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Tandem Fluorescent Protein Timers for Noninvasive Relative Protein Lifetime Measurement in Plants. Plant Physiology, 180(2), 718-731.
Zhang, Hongtao; Linster, Eric; Gannon, Lucy; Leemhuis, Wiebke; Rundle, Chelsea A.; Theodoulou, Frederica L. & Wirtz, Markus
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Comparative analysis of thylakoid protein complexes in state transition mutants nsi and stn7: focus on PSI and LHCII. Photosynthesis Research, 145(1), 15-30.
Koskela, Minna M.; Brünje, Annika; Ivanauskaite, Aiste; Lopez, Laura S.; Schneider, Dominik; DeTar, Rachael A.; Kunz, Hans-Henning; Finkemeier, Iris & Mulo, Paula
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Dual lysine and N‐terminal acetyltransferases reveal the complexity underpinning protein acetylation. Molecular Systems Biology, 16(7).
Bienvenut, Willy V; Brünje, Annika; Boyer, Jean‐Baptiste; Mühlenbeck, Jens S; Bernal, Gautier; Lassowskat, Ines; Dian, Cyril; Linster, Eric; Dinh, Trinh V; Koskela, Minna M; Jung, Vincent; Seidel, Julian; Schyrba, Laura K; Ivanauskaite, Aiste; Eirich, Jürgen; Hell, Rüdiger; Schwarzer, Dirk; Mulo, Paula; Wirtz, Markus; ... & Finkemeier, Iris
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NAA50 Is an Enzymatically Active Nα-Acetyltransferase That Is Crucial for Development and Regulation of Stress Responses. Plant Physiology, 183(4), 1502-1516.
Armbruster, Laura; Linster, Eric; Boyer, Jean-Baptiste; Brünje, Annika; Eirich, Jürgen; Stephan, Iwona; Bienvenut, Willy V.; Weidenhausen, Jonas; Meinnel, Thierry; Hell, Ruediger; Sinning, Irmgard; Finkemeier, Iris; Giglione, Carmela & Wirtz, Markus
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The Arabidopsis Nα‐acetyltransferase NAA60 locates to the plasma membrane and is vital for the high salt stress response. New Phytologist, 228(2), 554-569.
Linster, Eric; Layer, Dominik; Bienvenut, Willy V.; Dinh, Trinh V.; Weyer, Felix A.; Leemhuis, Wiebke; Brünje, Annika; Hoffrichter, Marion; Miklankova, Pavlina; Kopp, Jürgen; Lapouge, Karine; Sindlinger, Julia; Schwarzer, Dirk; Meinnel, Thierry; Finkemeier, Iris; Giglione, Carmela; Hell, Ruediger; Sinning, Irmgard & Wirtz, Markus
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The versatile interactome of chloroplast ribosomes revealed by affinity purification mass spectrometry. Nucleic Acids Research, 49(1), 400-415.
Westrich, Lisa Désirée; Gotsmann, Vincent Leon; Herkt, Claudia; Ries, Fabian; Kazek, Tanja; Trösch, Raphael; Armbruster, Laura; Mühlenbeck, Jens Stephan; Ramundo, Silvia; Nickelsen, Jörg; Finkemeier, Iris; Wirtz, Markus; Storchová, Zuzana; Räschle, Markus & Willmund, Felix
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Evolution-Driven Versatility of N Terminal Acetylation in Photoautotrophs. Trends in Plant Science, 26(4), 375-391.
Giglione, Carmela & Meinnel, Thierry
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GSNOR Contributes to Demethylation and Expression of Transposable Elements and Stress-Responsive Genes. Antioxidants, 10(7), 1128.
Rudolf, Eva Esther; Hüther, Patrick; Forné, Ignasi; Georgii, Elisabeth; Han, Yongtao; Hell, Rüdiger; Wirtz, Markus; Imhof, Axel; Becker, Claude; Durner, Jörg & Lindermayr, Christian
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Structural and functional characterization of the N-terminal acetyltransferase Naa50. Structure, 29(5), 413-425.e5.
Weidenhausen, Jonas; Kopp, Jürgen; Armbruster, Laura; Wirtz, Markus; Lapouge, Karine & Sinning, Irmgard
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A Continuous Assay Set to Screen and Characterize Novel Protein N-Acetyltransferases Unveils Rice General Control Non-repressible 5-Related N-Acetyltransferase2 Activity. Frontiers in Plant Science, 13 (2022, 2, 22).
Asensio, Thomas; Dian, Cyril; Boyer, Jean-Baptiste; Rivière, Frédéric; Meinnel, Thierry & Giglione, Carmela
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Cotranslational N-degron masking by acetylation promotes proteome stability in plants. Nature Communications, 13(1).
Linster, Eric; Forero, Ruiz Francy L.; Miklankova, Pavlina; Ruppert, Thomas; Mueller, Johannes; Armbruster, Laura; Gong, Xiaodi; Serino, Giovanna; Mann, Matthias; Hell, Rüdiger & Wirtz, Markus
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Disruption of the Nα-Acetyltransferase NatB Causes Sensitivity to Reductive Stress in Arabidopsis thaliana. Frontiers in Plant Science, 12 (2022, 1, 3).
Huber, Monika; Armbruster, Laura; Etherington, Ross D.; De La Torre, Carolina; Hawkesford, Malcolm J.; Sticht, Carsten; Gibbs, Daniel J.; Hell, Rüdiger & Wirtz, Markus
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From Nucleus to Membrane: A Subcellular Map of the N-Acetylation Machinery in Plants. International Journal of Molecular Sciences, 23(22), 14492.
Pożoga, Marlena; Armbruster, Laura & Wirtz, Markus
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HYPK promotes the activity of the N α -acetyltransferase A complex to determine proteostasis of nonAc-X 2 /N-degron–containing proteins. Science Advances, 8(24).
Miklánková; Pavlína; Linster; Eric; Boyer; Jean-Baptiste; Weidenhausen; Jonas; Mueller; Johannes; Armbruster; Laura; Lapouge; Karine; De, La Torre; Carolina; Bienvenut; Willy; Sticht; Carsten; Mann; Matthias; Meinnel; Thierry; Sinning; Irmgard; Giglione; Carmela; Hell; Rüdiger; Wirtz & Markus
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N-terminal modifications, the associated processing machinery, and their evolution in plastid-containing organisms. Journal of Experimental Botany, 73(18), 6013-6033.
Meinnel, Thierry & Giglione, Carmela
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OsHYPK-mediated protein N-terminal acetylation coordinates plant development and abiotic stress responses in rice. Molecular Plant, 15(4), 740-754.
Gong, Xiaodi; Huang, Yaqian; Liang, Yan; Yuan, Yundong; Liu, Yuhao; Han, Tongwen; Li, Shujia; Gao, Hengbin; Lv, Bo; Huang, Xiahe; Linster, Eric; Wang, Yingchun; Wirtz, Markus & Wang, Yonghong
