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The role of yeast serine/arginine(SR)-type mRNA-binding protein Npl3p and the DEAD-box helicase Dbp5p during translation

Subject Area Cell Biology
Term from 2005 to 2011
Project identifier Deutsche Forschungsgemeinschaft (DFG) - Project number 5453959
 
Final Report Year 2010

Final Report Abstract

A major challenge in current molecular biology is to understand how sequential steps in gene expression are coupled. Recently, much attention has been focused on the linkage of transcription, processing and mRNA-export. Our recent data identified the DEAD-box helicase Dbp5p, involved in mRNA export and the iron-sulfur (Fe/S) cluster containing protein Rli1p from Saccharomyces cerevisiae as novel translation termination factors. Physical interaction of Dbp5p was detected witheRF1, but not with eRF3. In contrast to that, Rli1p interacts with both termination factors. Both new termination factors show strong genetic interactions with both eukaryotic release factors eRF1 and eRF3. Mutant strains of DBP5 and the downregulation of RLII lead to defects in the recognition of the stop codon, reflected in a high readthrough activity. Moreover, we have shown that in mutants of DBP5, eRF3 is not recruited to the termination complex, suggesting that the dissociation of Dbp5p allows eRF3 entry into the complex. In summary, in our work identified and characterized Dbp5p and Rli1p as two novel translation termination factors that together with eRF1 and eRF3 mediate translation termination in eukaryotes.

Publications

  • (1995) Coactivation of RanGTPase and inhibition of GTP dissociation by Ran-GTP binding protein RanBP1. EMBO J., 14 (4): 705 - 715
    Bischoff, F. R., Krebber, H., Smirnova, E., Dong, W. and Ponstingl, H.
  • (1995) Coactivation of RanGTPase and inhibition of GTP dissociation by Ran-GTP binding protein RanBPI. EMBO J., 14 (4): 705 - 715
    Bischoff, F. R., Krebber, H., Smirnova, E., Dong, W. and Ponstingl, H.
  • (1995) Human RanGTPase-activating protein RanGAP1 is a homologue of yeast Rnalp involved in mRNA processing and transport. Proc. Natl. Acad. Sci. USA, 92 (5) 1749 - 1753
    Bischoff, F. R., Krebber, H., Kempf, T., Hermes, I. and Ponstingl, H.
  • (1998) A member of the Ran-binding family, Yrb2p, is involved in nuclear export signal-dependent nuclear protein export. Proc. Natl. Acad. Sci. USA, 95 (13): 7427-7432
    Taura, T., Krebber, H. and Silver, P. A.
  • (1999) Uncoupling of the hnRNP Npl3p from mRNA during the stress-induced block in mRNA. Genes & Dev. 13 (15): 1994-2004
    Krebber, H., Taura, T., Lee, M. and Silver, P. A.
  • (2001) Messenger RNAs are recruited for nuclear export during transcription. Genes & Dev., 15 (14): 1771-1782
    Lei, E. P., Krebber, H. and Silver, P. A.
  • (2001) The conserved np14 protein complex mediates proleasome-dependenl membrane-bound transcription factor activation. Mol. Biol. Cell, 12 (10): 326-3241
    Hitchcock, A. L., Krebber, H. and Silver, P. A.
  • (2003) Identificafion of Gbp2p as a novel poly(A)*RNA binding protein in yeast involved in the cytoplasmic delivery of mRNAs. EMBO-Rep. 4 (3): 278-283
    Windgassen, M. and Krebber, H.
  • (2003) Sac3 is an mRNA export factor that localizes to the cytoplasmic fibrils of the nuclear pore complex. Mol. Biol. Cell. 14 (3): 836-847
    Lei, E. P., Stern, C. A., Fahrenkrog, B., Krebber, H., Moi, T. I., Aebi, U. and Silver, P. A.
  • (2004) Differential export requirements for shuttling SR-type mRNA binding proteins. J. Biol. Chem. 279 (7):5049-5052
    Hacker, S. and Krebber, H.
  • (2004) Yeast shuttling SR-proteins Npl3p, Gbp2p and Hrb1p are part of the translated mRNAs and Npl3p can function as a translational repressor. Mol. Cell. Biol., 24 (23): 10479-10491
    Windgassen, M., Sturm, D., Cajigas, I.J., Gonzalez, C.I., Seedorf, M., Bastians, H. and Krebber, H.
  • (2007) The DEAD-box RNA-helicase DbpS functions in translation termination. Science, 315 (5812): 646-649
    Gross, T., Siepmann, A., Sturm, D., Windgassen, M., Scarelli, J., Cole C.N., Seedorf, M., and Krebber, H.
  • (2010) The iron-sulfur protein Rlil funclions in translation terminafion. EMBO Rep., II: 214 - 219
    Khoshnevis, S., Gross, T., Rotte, C., Baierlein, C., Ficner, R. and Krebber, H.
 
 

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