EXC 1028: Exzellenzcluster für Pflanzenwissenschaften - Von komplexen Eigenschaften zu synthetischen Modulen
Zusammenfassung der Projektergebnisse
Pflanzen und Algen ermöglichen das Leben auf der Erde durch die Umwandlung von Sonnenenergie, Wasser und CO2 in chemische Energie. Vor allem Nutzpflanzen stellen die Grundlage der menschlichen Zivilisationen dar. Die Anbauflächen werden jedoch knapper, Ressourcen wie Wasser und Dünger sind endlich. Die Folgen des menschengemachten Klimawandels und einer stetig wachsenden Weltbevölkerung stellen eine große Herausforderung für die Ernährungssicherung dar. Diese verlangen innovative Strategien für eine nachhaltige Pflanzenproduktion, die auf einem Verständnis darüber basieren, wie Pflanzen sich an ihre Umwelt anpassen und mit umweltbedingten Einschränkungen zurechtkommen. Die Antworten auf diese Fragen liegen in der natürlichen und künstlich herbeigeführten genetischen Variation die es Pflanzen und ihren Mikroben ermöglicht, beinahe alle Lebensräume der Erde zu besiedeln. Das Ziel des Exzellenzclusters für Pflanzenwissenschaften CEPLAS war, diese Information für vier komplexe Pflanzenmerkmale, die entscheidend für ein ressourcen-effizientes Wachstum sind, zu entschlüsseln: (A) Ein- und Mehrjährigkeit, (B) C4 Photosynthese, (C) Molekulare und (D) Stoffwechselbedingte Interkationen zwischen Pflanzen und Mikroben. CEPLAS I brachte die wissenschaftlichen Fähigkeiten der Region Köln-Düsseldorf in einem einzigartigen, interdisziplinären Konsortium aus experimentellen und theoretischen Biolog*innen zusammen. Durch die Nutzung quantitativer Genetik und Genomik, computerbasierter Modellierung und pflanzlicher Biochemie sowie von Methoden der Sequenzierung und der Kultivierung von Mikroben, konnten die Wissenschaftler*innen die genetischen Mechanismen der Ein- und Mehrjährigkeit, der evolutiven Entwicklung von C3 zu C4 Photosynthese und der komplexen Zusammensetzung des Pflanzen-assoziierten Mikrobioms entschlüsseln. Dabei wurden wichtige Ressourcen geschaffen, wie z.B. eine Bakterienkollektion, die die Mehrheit der mit der Pflanzen assoziierten Bakterien enthält. Der Aufbau personeller Ressourcen beinhaltete die Besetzung von 11 Professuren im Bereich der Pflanzenwissenschaften und Mikrobiologie, sowie der Bioinformatik, der Synthetischen und Theoretischen Biologie. Zwei der Professuren wurden durch Einwerbung renommierter AvH Professuren besetzt. Ein besonderer Erfolg war auch die Einführung des tenure-track Systems für die Besetzung von Nachwuchsprofessuren auf unabhängige Stellen mit definierten Karriereperspektiven. CEPLAS hat ein umfassendes Programm für die Förderung des wissenschaftlichen Nachwuchses aufgebaut, mit einem BSc Studiengang in Quantitativer Biologie, der gemeinsam von den beiden Universitäten angeboten wird, einer Graduiertenschule und einem strukturierten Postdoc-Programm. Darüber hinaus war CEPLAS aktiv in der Öffentlichkeitsarbeit und der politischen Kommunikation, indem eigene Formate der Wissenschaftskommunikation entwickelt wurden, um mit der Gesellschaft sowie relevanten Entscheidungsträgern in Dialog zu treten.
Link zum Abschlussbericht
https://dx.doi.org/10.2314/KXP:1698247036
Projektbezogene Publikationen (Auswahl)
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(2013) C(4) photosynthesis: from evolutionary analyses to strategies for synthetic reconstruction of the trait. Curr Opin Plant Biol 16(3):315-321
Denton, Alisandra K; Simon, Rüdiger & Weber, Andreas PM
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(2013) Evolution of C4 phosphoenolpyruvate carboxylase: enhanced feedback inhibitor tolerance is determined by a single residue. Mol Plant 6(6):1996-1999
Paulus, Judith Katharina; Niehus, Christian & Groth, Georg
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(2013) Evolution of C4 photosynthesis in the genus flaveria: establishment of a photorespiratory CO2 pump. Plant Cell 25(7):2522-2535
Schulze, S.; Mallmann, J.; Burscheidt, J.; Koczor, M.; Streubel, M.; Bauwe, H.; Gowik, U. & Westhoff, P.
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(2013) Gene transfer from bacteria and archaea facilitated evolution of an extremophilic eukaryote. Science 339(6124):1207-1210
Schönknecht, Gerald; Chen, Wei-Hua; Ternes, Chad M.; Barbier, Guillaume G.; Shrestha, Roshan P.; Stanke, Mario; Bräutigam, Andrea; Baker, Brett J.; Banfield, Jillian F.; Garavito, R. Michael; Carr, Kevin; Wilkerson, Curtis; Rensing, Stefan A.; Gagneul, David; Dickenson, Nicholas E.; Oesterhelt, Christine; Lercher, Martin J. & Weber, Andreas P. M.
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(2013) Genome of the red alga Porphyridium purpureum. Nat Commun 4:1941
Bhattacharya, Debashish; Price, Dana C.; Chan, Cheong Xin; Qiu, Huan; Rose, Nicholas; Ball, Steven; Weber, Andreas P. M.; Cecilia Arias, Maria; Henrissat, Bernard; Coutinho, Pedro M.; Krishnan, Anagha; Zäuner, Simone; Morath, Shannon; Hilliou, Frédérique; Egizi, Andrea; Perrineau, Marie-Mathilde & Yoon, Hwan Su
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(2013) Greater efficiency of photosynthetic carbon fixation due to single amino-acid substitution. Nat Commun 4:1518
Paulus, Judith Katharina; Schlieper, Daniel & Groth, Georg
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(2013) Light and the E3 ubiquitin ligase COP1/SPA control the protein stability of the MYB transcription factors PAP1 and PAP2 involved in anthocyanin accumulation in Arabidopsis. Plant J 74(4):638-651
Maier, Alexander; Schrader, Andrea; Kokkelink, Leonie; Falke, Christian; Welter, Bastian; Iniesto, Elisa; Rubio, Vicente; Uhrig, Joachim F.; Hülskamp, Martin & Hoecker, Ute
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(2013) PLGG1, a plastidic glycolate glycerate transporter, is required for photorespiration and defines a unique class of metabolite transporters. Proc Natl Acad Sci USA 110(8):3185-3190
Pick, Thea R.; Bräutigam, Andrea; Schulz, Matthias A.; Obata, Toshihiro; Fernie, Alisdair R. & Weber, Andreas P. M.
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(2013) Predicting C4 photosynthesis evolution: modular, individually adaptive steps on a Mount Fuji fitness landscape. Cell 153(7):1579-1588
Heckmann, David; Schulze, Stefanie; Denton, Alisandra; Gowik, Udo; Westhoff, Peter; Weber, Andreas P.M. & Lercher, Martin J.
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(2013) The Tarenaya hassleriana genome provides insight into reproductive trait and genome evolution of crucifers. Plant Cell 25(8):2813-2830
Cheng, Shifeng; van den Bergh, Erik; Zeng, Peng; Zhong, Xiao; Xu, Jiajia; Liu, Xin; Hofberger, Johannes; de Bruijn, Suzanne; Bhide, Amey S.; Kuelahoglu, Canan; Bian, Chao; Chen, Jing; Fan, Guangyi; Kaufmann, Kerstin; Hall, Jocelyn C.; Becker, Annette; Bräutigam, Andrea; Weber, Andreas P.M.; Shi, Chengcheng; ... & Schranz, M. Eric
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(2014) Quantitative divergence of the bacterial root microbiota in Arabidopsis thaliana relatives. Proc Natl Acad Sci USA 111(2):585-592
Schlaeppi, Klaus; Dombrowski, Nina; Oter, Ruben Garrido; Ver Loren van Themaat, Emiel & Schulze-Lefert, Paul
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(2014) Analysis of a plant complex resistance gene locus underlying immune-related hybrid incompatibility and its occurrence in nature. PLoS Genet 10(12):e1004848
Alcázar, Rubén; von Reth, Marcel; Bautor, Jaqueline; Chae, Eunyoung; Weigel, Detlef; Koornneef, Maarten & Parker, Jane E.
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(2014) Auxin represses stomatal development in dark-grown seedlings via Aux/IAA proteins. Development 141(16):3165-3176
Balcerowicz, Martin; Ranjan, Aashish; Rupprecht, Laura; Fiene, Gabriele & Hoecker, Ute
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(2014) Comparative transcriptome atlases reveal altered gene expression modules between two Cleomaceae C3 and C4 plant species. Plant Cell 26(8):3243-3260
Külahoglu, Canan; Denton, Alisandra K.; Sommer, Manuel; Maß, Janina; Schliesky, Simon; Wrobel, Thomas J.; Berckmans, Barbara; Gongora-Castillo, Elsa; Buell, C. Robin; Simon, Rüdiger; De Veylder, Lieven; Bräutigam, Andrea & Weber, Andreas P.M.
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(2014) Evolution of the Phosphoenolpyruvate Carboxylase Protein Kinase Family in C3 and C4 Flaveria spp. Plant Physiol 165(3):1076-1091
Aldous, Sophia H.; Weise, Sean E.; Sharkey, Thomas D.; Waldera-Lupa, Daniel M.; Stühler, Kai; Mallmann, Julia; Groth, Georg; Gowik, Udo; Westhoff, Peter & Arsova, Borjana
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(2014) Evolutionary conservation of cold-induced antisense RNAs of Flowering Locus C in Arabidopsis thaliana perennial relatives. Nat Commun 5:4457
Castaings, Loren; Bergonzi, Sara; Albani, Maria C.; Kemi, Ulla; Savolainen, Outi & Coupland, George
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(2014) Induced and natural variation of promoter length modulates the photoperiodic response of Flowering Locus T. Nat Commun 5:4558
Liu, Liangyu; Adrian, Jessika; Pankin, Artem; Hu, Jinyong; Dong, Xue; von Korff, Maria & Turck, Franziska
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(2014) Leaf shape evolution through duplication, regulatory diversification, and loss of a homeobox gene. Science 343(6172):780-783
Vlad, Daniela; Kierzkowski, Daniel; Rast, Madlen I.; Vuolo, Francesco; Dello Ioio, Raffaele; Galinha, Carla; Gan, Xiangchao; Hajheidari, Mohsen; Hay, Angela; Smith, Richard S.; Huijser, Peter; Bailey, C. Donovan & Tsiantis, Miltos
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(2014) Microbial genome-enabled insights into plant-microorganism interactions. Nat Rev Genet 15(12):797-813
Guttman, David S.; McHardy, Alice C. & Schulze-Lefert, Paul
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(2014) Plastid signals and the bundle sheath: mesophyll development in reticulate mutants. Mol Plant 7(1):14-29
Lundquist, Peter K.; Rosar, Christian; Bräutigam, Andrea & Weber, Andreas P.M.
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(2014) Short Vegetative Phase reduces gibberellin biosynthesis at the Arabidopsis shoot apex to regulate the floral transition. Proc Natl Acad Sci USA 111(26):E2760-2769
Andrés, Fernando; Porri, Aimone; Torti, Stefano; Mateos, Julieta; Romera-Branchat, Maida; García-Martínez, José Luis; Fornara, Fabio; Gregis, Veronica; Kater, Martin M. & Coupland, George
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(2014) Short-term acclimation of the photosynthetic electron transfer chain to changing light: a mathematical model. Philos Trans R Soc Lond B Biol Sci 369(1640):20130223
Ebenhöh, Oliver; Fucile, Geoffrey; Finazzi, Giovanni; Rochaix, Jean-David & Goldschmidt-Clermont, Michel
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(2014) Sorting Nexin1 is required for modulating the trafficking and stability of the Arabidopsis Iron-Regulated Transporter1. Plant Cell 26(3):1294-1307
Ivanov, Rumen; Brumbarova, Tzvetina; Blum, Ailisa; Jantke, Anna-Maria; Fink-Straube, Claudia & Bauer, Petra
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(2014) Spatial H2O2 signaling specificity: H2O2 from chloroplasts and peroxisomes modulates the plant transcriptome differentially. Mol Plant 7(7):1191-1210
Sewelam, Nasser; Jaspert, Nils; Van Der Kelen, Katrien; Tognetti, Vanesa B.; Schmitz, Jessica; Frerigmann, Henning; Stahl, Elia; Zeier, Jürgen; Van Breusegem, Frank & Maurino, Veronica G.
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(2014) The role of photorespiration during the evolution of C4 photosynthesis in the genus Flaveria. Elife 3:e02478
Mallmann, Julia; Heckmann, David; Bräutigam, Andrea; Lercher, Martin J; Weber, Andreas PM; Westhoff, Peter & Gowik, Udo
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(2015) A cop1 spa mutant deficient in COP1 and SPA proteins reveals partial co-action of COP1 and SPA during Arabidopsis post-embryonic development and photomorphogenesis. Mol Plant 8(3):479-481
Ordoñez-Herrera, Natalia; Fackendahl, Petra; Yu, Xu; Schaefer, Sabine; Koncz, Csaba & Hoecker, Ute
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(2015) A FYVE zinc finger domain protein specifically links mRNA transport to endosome trafficking. Elife 4
Pohlmann, Thomas; Baumann, Sebastian; Haag, Carl; Albrecht, Mario & Feldbrügge, Michael
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(2015) A receptor pair with an integrated decoy converts pathogen disabling of transcription factors to immunity. Cell 161(5):1074-1088
Le Roux, Clémentine; Huet, Gaëlle; Jauneau, Alain; Camborde, Laurent; Trémousaygue, Dominique; Kraut, Alexandra; Zhou, Binbin; Levaillant, Marie; Adachi, Hiroaki; Yoshioka, Hirofumi; Raffaele, Sylvain; Berthomé, Richard; Couté, Yohann; Parker, Jane E. & Deslandes, Laurent
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(2015) A reductionist approach to model photosynthetic self-regulation in eukaryotes in response to light. Biochem Soc Trans 43(6):1133-1139
Matuszyńska, Anna & Ebenhöh, Oliver
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(2015) A Secreted Effector Protein of Ustilago maydis Guides Maize Leaf Cells to Form Tumors. Plant Cell 27(4):1332-1351
Redkar, Amey; Hoser, Rafal; Schilling, Lena; Zechmann, Bernd; Krzymowska, Magdalena; Walbot, Virginia & Doehlemann, Gunther
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(2015) Convergent losses of decay mechanisms and rapid turnover of symbiosis genes in mycorrhizal mutualists. Nat Genet 47(4):410-415
Kohler, Annegret; Kuo, Alan; Nagy, Laszlo G; Morin, Emmanuelle; Barry, Kerrie W; Buscot, Francois; Canbäck, Björn; Choi, Cindy; Cichocki, Nicolas; Clum, Alicia; Colpaert, Jan; Copeland, Alex; Costa, Mauricio D; Doré, Jeanne; Floudas, Dimitrios; Gay, Gilles; Girlanda, Mariangela; Henrissat, Bernard; Herrmann, Sylvie; ... & Martin, Francis
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(2015) CUL4 forms an E3 ligase with COP1 and SPA to promote light-induced degradation of PIF1. Nat Commun 6:7245
Zhu, Ling; Bu, Qingyun; Xu, Xiaosa; Paik, Inyup; Huang, Xi; Hoecker, Ute; Deng, Xing Wang & Huq, Enamul
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(2015) Functional overlap of the Arabidopsis leaf and root microbiota. Nature 528(7582):364-369
Bai, Yang; Müller, Daniel B.; Srinivas, Girish; Garrido-Oter, Ruben; Potthoff, Eva; Rott, Matthias; Dombrowski, Nina; Münch, Philipp C.; Spaepen, Stijn; Remus-Emsermann, Mitja; Hüttel, Bruno; McHardy, Alice C.; Vorholt, Julia A. & Schulze-Lefert, Paul
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(2015) Genome expansion of Arabis alpina linked with retrotransposition and reduced symmetric DNA methylation. Nat Plants 1(2):14023
Willing, Eva-Maria; Rawat, Vimal; Mandáková, Terezie; Maumus, Florian; James, Geo Velikkakam; Nordström, Karl J.V.; Becker, Claude; Warthmann, Norman; Chica, Claudia; Szarzynska, Bogna; Zytnicki, Matthias; Albani, Maria C.; Kiefer, Christiane; Bergonzi, Sara; Castaings, Loren; Mateos, Julieta L.; Berns, Markus C.; Bujdoso, Nora; Piofczyk, Thomas; ... & Schneeberger, Korbinian
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(2015) Global Transcriptome Profiling of Developing Leaf and Shoot Apices Reveals Distinct Genetic and Environmental Control of Floral Transition and Inflorescence Development in Barley. Plant Cell 27(9):2318-2334
Digel, Benedikt; Pankin, Artem & von Korff, Maria
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(2015) Heterochrony underpins natural variation in Cardamine hirsuta leaf form. Proc Natl Acad Sci USA 112(33):10539-10544
Cartolano, Maria; Pieper, Bjorn; Lempe, Janne; Tattersall, Alex; Huijser, Peter; Tresch, Achim; Darrah, Peter R.; Hay, Angela & Tsiantis, Miltos
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(2015) Identification of the transporter responsible for sucrose accumulation in sugar beet taproots. Nat Plants 1:14001
Jung, Benjamin; Ludewig, Frank; Schulz, Alexander; Meißner, Garvin; Wöstefeld, Nicole; Flügge, Ulf-Ingo; Pommerrenig, Benjamin; Wirsching, Petra; Sauer, Norbert; Koch, Wolfgang; Sommer, Frederik; Mühlhaus, Timo; Schroda, Michael; Cuin, Tracey Ann; Graus, Dorothea; Marten, Irene; Hedrich, Rainer & Neuhaus, H. Ekkehard
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(2015) Immune responses: Photosynthetic defence. Nat Plants 1(6):15079
Göhre, Vera
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(2015) Mathematical modelling of the diurnal regulation of the MEP pathway in Arabidopsis. New Phytol 206(3):1075-1085
Pokhilko, Alexandra; Bou‐Torrent, Jordi; Pulido, Pablo; Rodríguez‐Concepción, Manuel & Ebenhöh, Oliver
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(2015) Metabolic connectivity as a driver of host and endosymbiont integration. Proc Natl Acad Sci USA 112(33):10208-10215
Karkar, Slim; Facchinelli, Fabio; Price, Dana C.; Weber, Andreas P. M. & Bhattacharya, Debashish
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(2015) Microbiota and Host Nutrition across Plant and Animal Kingdoms. Cell Host Microbe 17(5):603-616
Hacquard, Stéphane; Garrido-Oter, Ruben; González, Antonio; Spaepen, Stijn; Ackermann, Gail; Lebeis, Sarah; McHardy, Alice C.; Dangl, Jeffrey L.; Knight, Rob; Ley, Ruth & Schulze-Lefert, Paul
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(2015) Mutualistic root endophytism is not associated with the reduction of saprotrophic traits and requires a noncompromised plant innate immunity. New Phytol 207(3):841-857
Lahrmann, Urs; Strehmel, Nadine; Langen, Gregor; Frerigmann, Henning; Leson, Lisa; Ding, Yi; Scheel, Dierk; Herklotz, Siska; Hilbert, Magdalena & Zuccaro, Alga
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(2015) phenoVein-A Tool for Leaf Vein Segmentation and Analysis. Plant Physiol 169(4):2359-2370
Bühler, Jonas; Rishmawi, Louai; Pflugfelder, Daniel; Huber, Gregor; Scharr, Hanno; Hülskamp, Martin; Koornneef, Maarten; Schurr, Ulrich & Jahnke, Siegfried
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(2015) Real-time dynamics of peptide ligand-dependent receptor complex formation in planta. Sci Signal 8(388):ra76
Somssich, Marc; Ma, Qijun; Weidtkamp-Peters, Stefanie; Stahl, Yvonne; Felekyan, Suren; Bleckmann, Andrea; Seidel, Claus A. M. & Simon, Rüdiger
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(2015) Redesigning photosynthesis to sustainably meet global food and bioenergy demand. Proc Natl Acad Sci USA 112(28):8529-8536.
Ort, Donald R.; Merchant, Sabeeha S.; Alric, Jean; Barkan, Alice; Blankenship, Robert E.; Bock, Ralph; Croce, Roberta; Hanson, Maureen R.; Hibberd, Julian M.; Long, Stephen P.; Moore, Thomas A.; Moroney, James; Niyogi, Krishna K.; Parry, Martin A. J.; Peralta-Yahya, Pamela P.; Prince, Roger C.; Redding, Kevin E.; Spalding, Martin H.; van Wijk, Klaas J.; ... & Zhu, Xin Guang
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(2015) Structure and function of the bacterial root microbiota in wild and domesticated barley. Cell Host Microbe 17(3):392-403
Bulgarelli, Davide; Garrido-Oter, Ruben; Münch, Philipp C.; Weiman, Aaron; Dröge, Johannes; Pan, Yao; McHardy, Alice C. & Schulze-Lefert, Paul
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(2016) Pipecolic Acid Orchestrates Plant Systemic Acquired Resistance and Defense Priming via Salicylic Acid-Dependent and -Independent Pathways. Plant Cell 28(1):102-129
Bernsdorff, Friederike; Döring, Anne-Christin; Gruner, Katrin; Schuck, Stefan; Bräutigam, Andrea & Zeier, Jürgen
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(2016) A mathematical model of nonphotochemical quenching to study short-term light memory in plants. Biochim Biophys Acta 1857(12):1860-1869
Matuszyńska, Anna; Heidari, Somayyeh; Jahns, Peter & Ebenhöh, Oliver
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(2016) Adaptive evolution of complex innovations through stepwise metabolic niche expansion. Nat Commun 7:11607
Szappanos, Balázs; Fritzemeier, Jonathan; Csörgő, Bálint; Lázár, Viktória; Lu, Xiaowen; Fekete, Gergely; Bálint, Balázs; Herczeg, Róbert; Nagy, István; Notebaart, Richard A.; Lercher, Martin J.; Pál, Csaba & Papp, Balázs
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(2016) CLAVATA-WUSCHEL signaling in the shoot meristem. Development 143(18):3238-3248
Somssich, Marc; Je, Byoung Il; Simon, Rüdiger & Jackson, David
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(2016) Energy efficiency trade-offs drive nucleotide usage in transcribed regions. Nat Commun 7:11334
Chen, Wei-Hua; Lu, Guanting; Bork, Peer; Hu, Songnian & Lercher, Martin J.
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(2016) Evolution. Pathogen to powerhouse. Science 351(6274):659-660
Ball, Steven G.; Bhattacharya, Debashish & Weber, Andreas P. M.
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(2016) Insight into the evolution of the Solanaceae from the parental genomes of Petunia hybrida. Nat Plants 2(6):16074
Bombarely, Aureliano; Moser, Michel; Amrad, Avichai; Bao, Manzhu; Bapaume, Laure; Barry, Cornelius S.; Bliek, Mattijs; Boersma, Maaike R.; Borghi, Lorenzo; Bruggmann, Rémy; Bucher, Marcel; D'Agostino, Nunzio; Davies, Kevin; Druege, Uwe; Dudareva, Natalia; Egea-Cortines, Marcos; Delledonne, Massimo; Fernandez-Pozo, Noe; Franken, Philipp; ... & Kuhlemeier, Cris
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(2016) Pinpointing genes underlying annual/perennial transitions with comparative genomics. BMC Genomics 17(1):921
Heidel, Andrew J.; Kiefer, Christiane; Coupland, George & Rose, Laura E.
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(2016) Regulation of Pathogen-Triggered Tryptophan Metabolism in Arabidopsis thaliana by MYB Transcription Factors and Indole Glucosinolate Conversion Products. Mol Plant 9(5):682-695
Frerigmann, Henning; Piślewska-Bednarek, Mariola; Sánchez-Vallet, Andrea; Molina, Antonio; Glawischnig, Erich; Gigolashvili, Tamara & Bednarek, Paweł
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(2016) Root nodule symbiosis in Lotus japonicus drives the establishment of distinctive rhizosphere, root, and nodule bacterial communities. Proc Natl Acad Sci USA 113(49):E7996-E8005
Zgadzaj, Rafal; Garrido-Oter, Ruben; Jensen, Dorthe Bodker; Koprivova, Anna; Schulze-Lefert, Paul & Radutoiu, Simona
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(2016) StrigoQuant: A genetically encoded biosensor for quantifying strigolactone activity and specificity. Sci Adv 2(11):e1601266
Samodelov, Sophia L.; Beyer, Hannes M.; Guo, Xiujie; Augustin, Maximilian; Jia, Kun-Peng; Baz, Lina; Ebenhöh, Oliver; Beyer, Peter; Weber, Wilfried; Al-Babili, Salim & Zurbriggen, Matias D.
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(2016) Survival trade-offs in plant roots during colonization by closely related beneficial and pathogenic fungi. Nat Commun 7:11362
Hacquard, Stéphane; Kracher, Barbara; Hiruma, Kei; Münch, Philipp C.; Garrido-Oter, Ruben; Thon, Michael R.; Weimann, Aaron; Damm, Ulrike; Dallery, Jean-Félix; Hainaut, Matthieu; Henrissat, Bernard; Lespinet, Olivier; Sacristán, Soledad; Ver Loren van Themaat, Emiel; Kemen, Eric; McHardy, Alice C.; Schulze-Lefert, Paul & O’Connell, Richard J.
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(2016) The Cardamine hirsuta genome offers insight into the evolution of morphological diversity. Nat Plants 2(11):16167
Gan, Xiangchao; Hay, Angela; Kwantes, Michiel; Haberer, Georg; Hallab, Asis; Ioio, Raffaele Dello; Hofhuis, Hugo; Pieper, Bjorn; Cartolano, Maria; Neumann, Ulla; Nikolov, Lachezar A.; Song, Baoxing; Hajheidari, Mohsen; Briskine, Roman; Kougioumoutzi, Evangelia; Vlad, Daniela; Broholm, Suvi; Hein, Jotun; Meksem, Khalid; ... & Tsiantis, Miltos
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(2016) The Evolutionarily Conserved Protein Photosynthesis Affected Mutant71 Is Required for Efficient Manganese Uptake at the Thylakoid Membrane in Arabidopsis. Plant Cell 28(4):892-910
Schneider, Anja; Steinberger, Iris; Herdean, Andrei; Gandini, Chiara; Eisenhut, Marion; Kurz, Samantha; Morper, Anna; Hoecker, Natalie; Rühle, Thilo; Labs, Mathias; Flügge, Ulf Ingo; Geimer, Stefan; Schmidt, Sidsel Birkelund; Husted, Søren; Weber, Andreas P.M.; Spetea, Cornelia & Leister, Dario
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(2016) The fungal-specific beta-glucan-binding lectin FGB1 alters cell-wall composition and suppresses glucan-triggered immunity in plants. Nat Commun 7:13188
Wawra, Stephan; Fesel, Philipp; Widmer, Heidi; Timm, Malte; Seibel, Jürgen; Leson, Lisa; Kesseler, Leona; Nostadt, Robin; Hilbert, Magdalena; Langen, Gregor & Zuccaro, Alga
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(2017) Fine mapping of a major QTL for awn length in barley using a multiparent mapping population. Theor Appl Genet 130(2):269-281
Liller, Corinna B.; Walla, Agatha; Boer, Martin P.; Hedley, Pete; Macaulay, Malcolm; Effgen, Sieglinde; von Korff, Maria; van Esse, G. Wilma & Koornneef, Maarten
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(2017) Root microbiota dynamics of perennial Arabis alpina are dependent on soil residence time but independent of flowering time. ISME J 11(1):43-55
Dombrowski, Nina; Schlaeppi, Klaus; Agler, Matthew T; Hacquard, Stéphane; Kemen, Eric; Garrido-Oter, Ruben; Wunder, Jörg; Coupland, George & Schulze-Lefert, Paul
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(2017) Critical Assessment of Metagenome Interpretation-a benchmark of metagenomics software. Nat Methods 14(11):1063-1071
Sczyrba, Alexander; Hofmann, Peter; Belmann, Peter; Koslicki, David; Janssen, Stefan; Dröge, Johannes; Gregor, Ivan; Majda, Stephan; Fiedler, Jessika; Dahms, Eik; Bremges, Andreas; Fritz, Adrian; Garrido-Oter, Ruben; Jørgensen, Tue Sparholt; Shapiro, Nico
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(2017) Defense against Reactive Carbonyl Species Involves at Least Three Subcellular Compartments Where Individual Components of the System Respond to Cellular Sugar Status. Plant Cell 29(12):3234-3254
Schmitz, Jessica; Dittmar, Isabell C.; Brockmann, Jörn D.; Schmidt, Marc; Hüdig, Meike; Rossoni, Alessandro W. & Maurino, Veronica G.
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(2017) Dissection of iron signaling and iron accumulation by overexpression of subgroup Ib bHLH039 protein. Sci Rep 7(1):10911
Naranjo-Arcos, Maria Augusta; Maurer, Felix; Meiser, Johannes; Pateyron, Stephanie; Fink-Straube, Claudia & Bauer, Petra
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(2017) Divergence of regulatory networks governed by the orthologous transcription factors FLC and PEP1 in Brassicaceae species. Proc Natl Acad Sci USA 114(51):E11037-E11046
Mateos, Julieta L.; Tilmes, Vicky; Madrigal, Pedro; Severing, Edouard; Richter, René; Rijkenberg, Colin W. M.; Krajewski, Paweł & Coupland, George
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(2017) In vivo FRET-FLIM reveals celltype-specific protein interactions in Arabidopsis roots. Nature 548(7665):97-102
Long, Yuchen; Stahl, Yvonne; Weidtkamp-Peters, Stefanie; Postma, Marten; Zhou, Wenkun; Goedhart, Joachim; Sánchez-Pérez, María-Isabel; Gadella, Theodorus W. J.; Simon, Rüdiger; Scheres, Ben & Blilou, Ikram
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(2017) Machine Learning Techniques for Predicting Crop Photosynthetic Capacity from Leaf Reflectance Spectra. Mol Plant 10(6):878-890
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