Biometric tools for microarrays

• Antragsteller: Professor Dr. Hans-Peter Piepho
• Fachliche Zuordnung: Pflanzenzüchtung, Pflanzenpathologie
• Förderung: Förderung von 2003 bis 2010
• Projektkennung: Deutsche Forschungsgemeinschaft (DFG) - Projektnummer 5403793

• Erstellungsjahr: 2010

Zusammenfassung der Projektergebnisse

Keine Zusammenfassung vorhanden

Projektbezogene Publikationen (Auswahl)

• 2005. Is dominance an artefact governed by the choice of scale? Euphytica, Vol. 145. 2005, Issue 1, pp 113-121.
  Keller, B., Piepho H.P.
  (Siehe online unter https://dx.doi.org/10.1007/s10681-005-0550-6)
• 2005. Optimal allocation in designs for assessing heterosis from cDNA gene expression data. Genetics, vol. 171. 2005, no. 1, pp. 359-364.
  Piepho H.P.
  (Siehe online unter https://dx.doi.org/10.1534/genetics.104.038448)
• 2005. Simultaneous confidence intervals for two estimable functions and their ratio under a linear model. The American Statistician, Vol. 59. 2005, No. 4, pp. 292-300.
  Piepho H.P., Emrich K.
  (Siehe online unter https://dx.doi.org/10.1198/000313005X70605)
• 2006. Combining signals from spotted cDNA microarrays obtained at different scanning intensities. Bioinformatics, Vol. 22.2006, Issue 7, Pp. 802-807.
  Piepho H.P., Keller B., Höcker N., Hochholdinger F.
  (Siehe online unter https://dx.doi.org/10.1093/bioinformatics/btk047)
• 2006. Manifestation of heterosis during early maize (Zea mays L.) root development. Theoretical and Applied Genetics, Vol. 112. 2006, Issue 3, pp. 421-429.
  Hoecker N., Keller B., Piepho H.P., Hochholdinger F.
  (Siehe online unter https://dx.doi.org/10.1007/s00122-005-0139-4)
• 2006. ZmGrp3: identification of a novel marker for root initiation in maize and development of a robust assay to quantify allele-specific contribution to gene expression in hybrids. Theoretical and Applied Genetics, Vol. 113. 2006, Issue 7, pp. 1305-1315.
  Woll K., Dressel A., Sakai H., Piepho H.P., Hochholdinger F.
  (Siehe online unter https://dx.doi.org/10.1007/s00122-006-0384-1)
• 2007. Comparative expression profiling in meristems of inbred – hybrid triplets of maize. Plant Molecular Biology, Vol. 63. 2007, Issue 1, pp 21-34.
  Użarowska A., Keller B., Piepho H.P., Schwarz G., Ingvardsen C., Wenzel G., Lübberstedt T.
  (Siehe online unter https://dx.doi.org/10.1007/s11103-006-9069-z)
• 2007. Heterosis for biomass-related traits in Arabidopsis investigated by QTL analysis of the triple test cross design with recombinant inbred lines. Genetics, Vol. 177. 2007, no. 3, pp. 1839-1850.
  Kusterer K., Piepho H.P., Schön C.C., Utz H.F., Muminović J., Meyer R.C., Altmann T., Melchinger A.E.
  (Siehe online unter https://dx.doi.org/10.1534/genetics.107.077628)
• 2007. Prediction of single-cross hybrid performance in maize using haplotype blocks associated with QTL for grain yield. Theoretical and Applied Genetics, Vol. 114.2007, Issue 8, pp 1345-1355.
  Schrag T.A., Maurer H.P., Melchinger A.E., Piepho H.P., Peleman J., Frisch M.
  (Siehe online unter https://dx.doi.org/10.1007/s00122-007-0521-5)
• 2008. Analysis of nonadditive protein accumulation in young primary roots of a maize (Zea mays L.) F1-hybrid compared to its parental inbred lines. Proteomics, Special Issue: Focus on imaging mass sprectrometry, Vol. 8. 2008, Issue 18, pp. 3882–3894.
  Höcker N., Lamkemeyer T., Sarholz B., Fladerer C., Madlung J., Piepho H.P., Nordheim A., Hochholdinger F.
  (Siehe online unter https://dx.doi.org/10.1002/pmic.200800023)
• 2008. Comparison of maize (Zea mays) hybrid and parental inbred line primary root transcriptomes suggests organ specific patterns of non-additive gene expression and conserved expression trends between different hybrids in a subset of genes. Genetics, Vol. 179. 2008, no. 3, pp. 1275-1283.
  Höcker N., Keller B., Chollet D., Descombes P., Piepho H.P., Hochholdinger F.
  (Siehe online unter https://dx.doi.org/10.1534/genetics.108.088278)
• 2008. Trends in genetic variance components during 30 years of hybrid maize breeding at the University of Hohenheim. Plant Breeding, Vol. 127. 2008, Issue 5, pp. 446–451.
  Fischer S., Möhring J., Schön C.C., Piepho H.P., Klein D., Schipprack W., Utz H.F., Melchinger A.E., Reif J.C.
  (Siehe online unter https://dx.doi.org/10.1111/j.1439-0523.2007.01475.x)
• 2009. Impact of genetic divergence on the ratio of variance due to specific versus general combining ability in winter triticale. Crop Science, Vol. 49.2009, No. 6, pp. 2119-2122.
  Fischer S., Möhring J., Maurer H.P., Piepho H.P., Thiemt E.M., Schön C.C., Melchinger A.E., Reif J.C.
  (Siehe online unter https://dx.doi.org/10.2135/cropsci2008.12.0689)
• 2009. Molecular marker-based prediction of hybrid performance in maize using unbalanced data from multiple experiments with factorial crosses. Theoretical and Applied Genetics, Vol. 118. 2009, Issue 4, pp. 741-751.
  Schrag T.A., Möhring J., Maurer H.P., Dhillon B.S., Melchinger A.E., Piepho H.P., Sørensen A.P., Frisch M.
  (Siehe online unter https://dx.doi.org/10.1007/s00122-008-0934-9)
• 2009. Unravelling epistasis with triple testcross progenies of near isogenic lines. Genetics, Vol. 181. 2009, no. 1, pp. 247-257.
  Reif J., Kusterer B., Piepho H.P., Meyer R.. Altmann T., Schön C., Melchinger A.E.
  (Siehe online unter https://dx.doi.org/10.1534/genetics.108.093047)
• 2010. Development of heterotic groups in triticale. Crop Science, Vol. 50. 2010, Issue 2, pp. 584-590.
  Fischer S., Maurer H.P., Würschum T., Möhring J., Piepho H.P., Schön C.C., Thiemt E.M., Dhillon B.S., Melchinger A.E., Reif J.C.
  (Siehe online unter https://dx.doi.org/10.2135/cropsci2009.04.0225)
• 2010. Heterosis in early seed development: a comparative study of F1 embryo and endosperm tissues six days after fertilization. Theoretical and Applied Genetics, Vol. 120.2010, Issue 2, pp. 389-400.
  Jahnke S., Sarholz B., Kühr V., Gutierrez-Marcos J.F., Geiger H.H., Piepho H.P., Scholten S.
  (Siehe online unter https://dx.doi.org/10.1007/s00122-009-1207-y)
• 2010. Molecular marker assisted broadening of the Central European heterotic groups in rye with Eastern European germplasm. Theoretical and Applied Genetics, Vol. 120. 2010, Issue 2, pp. 291-299.
  Fischer S., Melchinger A.E., Korzun V., Wilde P., Schmiedchen B., Möhring J., Piepho H.P., Dhillon B.S., Würschum T., Reif J.C.
  (Siehe online unter https://dx.doi.org/10.1007/s00122-009-1124-0)