GSC 220:  Heidelberg Graduate School of Mathematical and Computational Methods for the Sciences

• Subject Area: Mathematics ; Basic Research in Biology and Medicine ; Computer Science ; Medicine ; Physical Chemistry ; Water Research
• Term: from 2007 to 2019
• Project identifier: Deutsche Forschungsgemeinschaft (DFG) - Project number 39072701

• Final Report Year: 2019

Final Report Abstract

Scientific Computing – the science of developing cutting edge mathematical and computational methods to solve challenging problems in application sciences – is widely regarded as a key technology of the 21st century. High expectations from modeling, simulation and optimization, the data deluge from high-resolution and high-throughput experiments, the combination of data and process-oriented modeling and emerging demands from fields beyond the natural sciences provide challenges that must be met with innovative methodological research. The Interdisciplinary Center for Scientific Computing (IWR) is tackling such research questions highly successfully as one of the central institutions of Heidelberg University. The Heidelberg Graduate School of Mathematical and Computational Methods for the Sciences (HGS MathComp) is now an independent research institution serving as the core interdisciplinary doctoral training facility. A team of 50 research groups with 25 years of experience in structured doctoral training provided a unique starting point for a successful first and second period of funding. There is an enormous demand for young scientists who are well-trained in methods of scientific computing and its applications. The HGS MathComp meets this demand with a structured doctoral training program embedded in a highly interdisciplinary research environment that stimulates the development of new and powerful methods. The scientific curriculum is complemented by training key qualifications expected from future leaders in academia and industry. Early scientific independence and integration into the international scientific community is promoted by presentations at international conferences, research stays abroad and complemented by an international visitors and guest doctoral program embedded in a network of partner institutions. With more than 250 graduates and about 100 current excellent doctoral students HGS Math- Comp will now become a permanent institution continuously pursuing and improving its core services in cooperation with participating research institutions and departments as well as the graduate academy of the university. Encouraged by amazing successes in both funding periods the school will continue to concentrate on exploiting the university-wide potential for interdisciplinary cooperation as part of one of the bridge-building facilities in the strategy of the university. An integrated research-oriented master phase is part of the research-oriented teaching strategy of the university and the international master’s program ‘Scientific Computing’ established at the Faculty of Mathematics and Computer Science provides a tailored preparation for interdisciplinary research. Knowledge transfer between industry and academia is ensured by the established series of modeling days and the highly successful Heidelberg Collaboratory for Image Processing. The detailed sustainability plan will ensure a long term perspective for HGS MathComp as a top-level interdisciplinary endeavor well integrated into both Heidelberg university and the international research community.

Link to the final report

https://doi.org/10.2314/KXP:1698966601

Publications

• Integrating genomic and transcriptomic data into graph based approaches for defining essential reactions in the metabolic network of escherichia coli. In A. Hinneburg, editor, LWA 2007, pages 55–60. 2007
  K. Plaimas, M. Oswald, R. Eils, and R. König
  
• Random loop model for long polymers. Physical Review E, 76(5, 1), Nov 2007
  M. Bohn, D. W. Heermann, and R. van Driel
  
• Average crossing number of gaussian and equilateral chains with and without excluded volume. The European Physical Journal, 62(2):209–214, 2008
  P. M. Diesinger and D. W. Heermann
  
• Inverse problem of lindenmayer systems on branching structures. In Modeling, simulation and optimization of complex processes, pages 163–185. 2008
  S. Chuai-Aree, W. Jäger, and H. G. Bock
  
• Goal-oriented error control of the iterative solution of finite element equations. Journal of Numerical Mathematics, 17:143–172, 07 2009
  D. Meidner, R. Rannacher, and J. Vihharev
  
• Modeling of Asymmetric Cell Division in Hematopoietic Stem Cells-Regulation of Self-Renewal Is Essential for Efficient Repopulation. Stem Cells And Development, 18(3):377–385, Apr 2009
  A. Marciniak-Czochra, T. Stiehl, A. D. Ho, W. Jaeger, and W. Wagner
  
• Reconstructing nonlinear dynamic models of gene regulation using stochastic sampling. BMC Bioinformatics, 10, Dec 28 2009
  J. Mazur, D. Ritter, G. Reinelt, and L. Kaderali
  
• When less can yield more - Computational preprocessing of MS/MS spectra for peptide identification. Proteomics, 9(21):4978–4984, Nov 2009
  B. Y. Renard, M. Kirchner, F. Monigatti, A. R. Ivanov, J. Rappsilber, D. Winter, J. A. J. Steen, F. A. Hamprecht, and H. Steen
  
• A multiscale model for red blood cell mechanics. Biomechanics and Modeling In Mechanobiology, 9(1):1–17, Feb 2010
  D. Hartmann
  
• Adaptive finite element solution of eigenvalue problems. Journal of Numerical Mathematics, 18(4):303–327, 2010
  R. Rannacher, A. Westenberger, and W. Wollner
  
• Electron-Transfer Properties of an Efficient Nonheme Iron Oxidation Catalyst with a Tetradentate Bispidine Ligand. Angewandte Chemie - International Edition, 49(14):2622–2625, 2010
  P. Comba, S. Fukuzumi, H. Kotani, and S. Wunderlich
  
• Magnesium-Dependent Active-Site Conformational Selection in the Diels-Alderase Ribozyme. Journal of the American Chemical Society, 132(36):12587–12596, Sep 15 2010
  T. Berezniak, M. Zahran, P. Imhof, A. Jaeschke, and J. C. Smith
  
• Minimal curvature trajectories: Riemannian geometry concepts for slow manifold computation in chemical kinetics. Journal of Computational Physics, 229(18):6512–6533, Sep 1 2010
  D. Lebiedz, V. Reinhardt, and J. Siehr
  
• PathWave: discovering patterns of differentially regulated enzymes in metabolic pathways. Bioinformatics, 26(9):1225–1231, May 1 2010
  G. Schramm, S. Wiesberg, N. Diessl, A.-L. Kranz, V. Sagulenko, M. Oswald, G. Reinelt, F. Westermann, R. Eils, and R. Koenig
  
• Automated Detection and Segmentation of Synaptic Contacts in Nearly Isotropic Serial Electron Microscopy Images. PLoS One, 6(10), Oct 21 2011
  A. Kreshuk, C. N. Straehle, C. Sommer, U. Koethe, M. Cantoni, G. Knott, and F. A. Hamprecht
  
• Large eddy simulation of the unsteady flow-field in an idealized human mouth-throat configuration. Journal of Biomechanics, 44(16):2768–2774, 2011
  X. Cui and E. Gutheil
  
• Measuring oxygen reduction/evolution reactions on the nanoscale. Nature Chemistry, 3(9):707–713, Sep 2011
  A. Kumar, F. Ciucci, A. N. Morozovska, S. V. Kalinin, and S. Jesse
  
• Modeling of auto-catalytic halogen release and ozone depletion in polar regions. Journal of Physics, 318 (6 S.), 2011
  L. Cao and E. Gutheil
  
• Optimization as an analysis tool for human complex problem solving. SIAM Journal on Optimization, 21(3):936–959, 2011
  S. Sager, C. M. Barth, H. Diedam, M. Engelhart, and J. Funke
  
• Bichromatic particle streak velocimetry bPSV. Experiments In Fluids, 53(5):1405–1420, Nov 2012
  B. Voss, J. Stapf, A. Berthe, and C. S. Garbe
  
• Efficient direct multiple shooting for nonlinear model predictive control on long horizons. Journal of Process Control, 22(3):540–550, 2012
  C. Kirches, L. Wirsching, H. G. Bock, and J. P. Schlöder
  
• Estimating parameters in optimal control problems. SIAM Journal on Scientific Computing, 34(3):A1707–A1728, 2012
  K. Hatz, J. P. Schloeder, and H. G. Bock
  
• Expression-dependent folding of interphase chromatin. PLoS One, 7(2012), 2012
  H. Jerabek and D. W. Heermann
  
• On the development and generalizations of Cahn- Hilliard equations within a thermodynamic framework. Zeitschrift für Angewandte Mathematik und Physik, 63(1):145–169, Feb 2012
  M. Heida, J. Malek, and K. R. Rajagopal
  
• One Plus One Makes Three (for Social Networks). PLoS One, 7(4), Apr 6 2012
  E.-A. Horvat, M. Hanselmann, F. A. Hamprecht, and K. A. Zweig
  
• Rif2 Promotes a Telomere Fold-Back Structure through Rpd3L Recruitment in Budding Yeast. PLoS Genetics, 8(9), Sep 2012
  H. Poschke, M. Dees, M. Chang, S. Amberkar, L. Kaderali, R. Rothstein, and B. Luke
  
• Similarity analysis of cell movements in video microscopy. IEEE Symposium on Biological Data Visualization 2012, Biovis 2012 - Proceedings, Pages 69–76, 2012
  J. Fangerau, B. Höckendorf, J. Wittbrodt, and H. Leitte
  
• Unwrapping of Nucleosomal DNA Ends: A Multiscale Molecular Dynamics Study. Biophysical Journal, 102(4):849–858, Feb 22 2012
  K. Voltz, J. Trylska, N. Calimet, J. C. Smith, and J. Langowski
  
• A systems medicine research approach for studying alcohol addiction. Addiction biology, 18(6):883–896, 2013
  R. Spanagel, G. Koehr, F. Matthäus, H. R. Noori, and W. H. Sommer
  
• Adaptive finite element analysis of nonlinear problems. Journal of numerical mathematics, 21(1):23–62, 2013
  R. Rannacher and J. Vihharev
  
• Chromosome segregation by the Escherichia coli Min system. Molecular Systems Biology, 9, Sep 2013
  B. Di Ventura, B. Knecht, H. Andreas, W. J. Godinez, M. Fritsche, K. Rohr, W. Nickel, D. W. Heermann, and V. Sourjik
  
• COAL: a generic modelling and prototyping framework for convex optimization problems of variational image analysis. Optimization Methods & Software, 28(5):1081–1094, Oct 1 2013
  D. Breitenreicher, J. Lellmann, and C. Schnoerr
  
• Computational and experimental analysis identified 6-diazo-5-oxonorleucine as a potential agent for treating infection by Plasmodium falciparum. Infection Genetics and Evolution, 20:389–395, Dec 2013
  K. Plaimas, Y. Wang, S. O. Rotimi, G. Olasehinde, S. Fatumo, M. Lanzer, E. Adebiyi, and R. Koenig
  
• Eulerian techniques for fluid-structure interactions. In A. Abdulle, S. Deparis, D. Kreßner, F. Nobile, and M. Picasso, editors, Numerical Mathematics and Advanced Applications - ENUMATH 2013, pages 745–754. 2015
  S. Frei, T. Richter, and T. Wick
  
• Identifying a parameterisation of the soil water retention curve from on-ground gpr measurements. Hydrology and Earth System Sciences Discussions, 17(2):611–618, 2013
  A. Dagenbach, J. S. Buchner, P. Klenk, and K. Roth
  
• Integer programming models for the target visitation problem. In Proceedings of the 16th International Multiconference Information Society - IS 2013, Pages 569–572, 2013
  A. Hildenbrandt, G. Reinelt, and O. Heismann
  
• Optimality Bounds for a Variational Relaxation of the Image Partitioning Problem. Journal of Mathematical Imaging and Vision, 47(3, Si):239–257, Nov 2013
  J. Lellmann, F. Lenzen, and C. Schnoerr
  
• Organism-adapted specificity of the allosteric regulation of pyruvate kinase in lactic acid bacteria. PLoS ONE, 9, 2013
  N. V. Veith, A. Feldman-Salit, U. Kummer, and R. C. Wade
  
• Replication vesicles are load- and choke-points in the hepatitis c virus lifecycle. PLoS Pathogens, 9, 2013
  M. Binder, N. Sulaimanov, S. M. Lenz, J. P. Schlöder, R. Bartenschlager, V. Lohmann, and L. Kaderali
  
• Uncertainty Quantification in Complex Simulation Models Using Ensemble Copula Coupling. Statistical Science, 28(4, Si):616–640, Nov 2013
  R. Schefzik, T. L. Thorarinsdottir, and T. Gneiting. Uncertainty Quantification in Complex Simulation Models Using Ensemble Copula Coupling.
  
• A Case Study on a Quality Assurance Process for a Scientific Framework. Computing in Science & Engineering, 16(3):58–66, May-Jun 2014
  H. Remmel, B. Paech, C. Engwer, and P. Bastian
  
• Depletion of the chromatin looping proteins ctcf and cohesin causes chromatin compaction. PLoS Computational Biology, 10(2014), 2014
  M. Tark-Dame, H. Jerabek, and D. W. Heermann
  
• Detection of amines with extended distyrylbenzenes by strip assays. The Journal of Organic Chemistry, 79(14):6634–6645, 2014
  J. Kumpf, J. Freudenberg, K. M. Fletcher, A. Dreuw, and U. H. F. Bunz
  
• How chromatin looping and nuclear envelope attachment affect genome organization in eukaryotic cell nuclei. International Review of Cell and Molecular Biology, 307:351–381, 2014
  H. Jerabek and D. W. Heermann
  
• Modeling and simulation of tropospheric ozone depletion in the polar spring. In Fundamental issues and perspectives in fluid mechanics, industrial and environmental applications of fluid mechanics, issues and perspectives in automotive flows, gas-solid flows. American Society of Mechanical Engineers, 2014
  L. Cao and E. Gutheil
  
• Modeling and simulation of water and pvp/water evaporating spray flows using the direct quadrature method of moments. Atomization and Sprays, 24(5):403–429, 2014
  S. R. Gopireddy, R. M. Humza, and E. Gutheil
  
• Spike patterns in a reaction-diffusion ODE model with turing instability. Mathematical Methods in the Applied Sciences, 37(9):1377–1391, 2014
  S. Härting and A. Marciniak-Czochra
  
• The affinely invariant distance correlation. Bernoulli, 20(4):2305–2330, Nov 2014
  J. Dueck, D. Edelmann, T. Gneiting, and D. Richards
  
• A new model for the aerobic metabolism of yeast allows the detailed analysis of the metabolic regulation during glucose pulse. Biophysical Chemistry, 206:40–57, 2015
  D. Kesten Weth, U. Kummer, S. Sahle, and K. Hübner
  
• Adapting algebraic diagrammatic construction schemes for the polarization propagator to problems with multi-reference electronic ground states exploiting the spin-flip ansatz. Journal of Chemical Physics, 143(12), Sep 28 2015
  D. Lefrancois, M. Wormit, and A. Dreuw
  
• An Active-Set Quadratic Programming Method Based On Sequential Hot-Starts. SIAM Journal on Optimization, 25(2):967–994, 2015
  T. Johnson, C. Kirches, and A. Wächter
  
• Application of reactive transport modeling to growth and transport of microorganisms in the capillary fringe. Vadose Zone Journal, 14(5):1–17, 2015
  P. Hron, P. Bastian, and O. Ippisch
  
• Crucial HSP70 co-chaperone complex unlocks metazoan protein disaggregation. Nature, 524(7564):247+, Aug 13 2015
  N. B. Nillegoda, J. Kirstein, A. Szlachcic, M. Berynskyy, A. Stank, F. Stengel, K. Arnsburg, X. Gao, A. Scior, R. Aebersold, D. L. Guilbride, R. C. Wade, R. I. Morimoto, M. P. Mayer, and B. Bukau
  
• A weakly penalized discontinuous galerkin method for radiation in dense, scattering media. Computational methods in applied mathematics, 16(4):563–577, 2016
  G. Kanschat and J. P. Lucero Lorca
  
• Advances in Quantum Mechanochemistry: Electronic Structure Methods and Force Analysis. Chemical Reviews, 116(22):14137–14180, Nov 23 2016
  T. Stauch and A. Dreuw
  
• Asymmetric mono- and dinuclear Ga-III and Zn-II complexes as models for purple acid phosphatases. Journal of Inorganic Biochemistry, 162:343–355, Sep 2016
  S. Bosch, P. Comba, L. R. Gahan, and G. Schenk
  
• Cooperative data fusion of transmission and surface scan for improving limited-angle computed tomography reconstruction. NDT & E International, 83:24–31, Oct 2016
  Y. Liu, A. Beyer, P. Schuetz, J. Hofmann, A. Flisch, and U. Sennhauser
  
• Knots “Choke Off” Polymers upon Stretching. Angewandte Chemie - International Edition, 55(2):811–814, Jan 11 2016
  T. Stauch and A. Dreuw
  
• Mass concentration in a nonlocal model of clonal selection. Journal of Mathematical Biology, 73(4):1001–1033, 2016
  J.-E. Busse, P. Gwiazda, and A. Marciniak-Czochra
  
• Mathematical modeling and simulation of the evolution of plaques in blood vessels. Journal of Mathematical Biology, 72(4, Si):973–996, Mar 2016
  Y. Yang, W. Jaeger, M. Neuss-Radu, and T. Richter
  
• The deal.ii library, version 8.3. Archive of numerical software, 4(100):1–11, 2016
  W. Bangerth, G. Kanschat, and M. Maier
  
• The Radical Anion and Dianion of Tetraazapentacene. Angewandte Chemie - International Edition, 55(35):10498–10501, Aug 22 2016
  L. Ji, M. Haehnel, I. Krummenacher, P. Biegger, F. L. Geyer, O. Tverskoy, M. Schaffroth, J. Han, A. Dreuw, T. B. Marder, and U. H. F. Bunz
  
• An objective comparison of cell-tracking algorithms. Nature Methods, 14(12):1141+, Dec 2017
  V. Ulman, M. Maska, K. E. G. Magnusson, O. Ronneberger, C. Haubold, N. Harder, P. Matula, P. Matula, D. Svoboda, M. Radojevic, I. Smal, K. Rohr, J. Jalden, H. M. Blau, O. Dzyubachyk, B. Lelieveldt, P. Xiao, Y. Li, S.-Y. Cho, A. C. Dufour, J.-C. Olivo-Marin, C. C. Reyes-Aldasoro, J. A. Solis-Lemus, R. Bensch, T. Brox, J. Stegmaier, R. Mikut, S. Wolf, F. A. Hamprecht, T. Esteves, P. Quelhas, O. Demirel, L. Malmstrom, F. Jug, P. Tomancak, E. Meijering, A. Munoz-Barrutia, M. Kozubek, and C. Ortiz-de Solorzano
  
• Distance correlation coefficients for Lancaster distributions. Journal of Multivariate Analysis, 154:19–39, Feb 2017
  J. Dueck, D. Edelmann, and D. Richards
  
• Dopelib: differential equations and optimization environment. Archive of Numerical Software, 5(2):1–14, 2017
  C. Goll, T. Wick, and W. Wollner
  
• High performance computing for cognitionguided cardiac surgery. In H. G. Bock, H. X. Phu, R. Rannacher, and J. P. Schlöder, editors, Modeling, Simulation and Optimization of Complex Processes HPSC 2015, pages 205–221. 2017
  N. Schoch, R. De Simone, and V. Heuveline
  
• Multicut brings automated neurite segmentation closer to human performance. Nature Methods, 14(2):101–102, Feb 2017
  T. Beier, C. Pape, N. Rahaman, L. Prange, S. Berg, D. D. Bock, A. Cardona, G. W. Knott, S. M. Plaza, L. K. Scheffer, U. Koethe, A. Kreshuk, and F. A. Hamprecht
  
• Numerical modeling of heat exchange and unsaturatedsaturated flow in porous media. Computers & Mathematics With Applications, 77(6):1668–1680, Mar 15 2019. 7th International Conference on Advanced Computational Methods in Engineering (ACUMEN), Ghent Univ., Ghent, Belgium, Sep 18-22, 2017
  J. Kacur, P. Mihala, and M. Toth
  
• Optimal control based stiffness identification of an ankle-foot orthosis using a predictive walking model. Frontiers in computational neuroscience, 11, 2017
  M. Sreenivasa, M. Millard, M. L. Felis, K. Mombaur, and S. I. Wolf
  
• Optogenetically stimulating intact rat corticospinal tract post-stroke restores motor control through regionalized functional circuit formation. Nature Communications, 8, 2017
  A.-S. Wahl, U. Büchler, B. Brattoli, and B. Ommer
  
• Partial stability for nonlinear model predictive control. Automatica, 78:14–19, Apr 2017
  H. C. La, A. Potschka, and H. G. Bock
  
• Preparation, Properties, and Structures of the Radical Anions and Dianions of Azapentacenes. Journal of the American Chemical Society, 139(44):15968–15976, Nov 8 2017
  L. Ji, A. Friedrich, I. Krummenacher, A. Eichhorn, H. Braunschweig, M. Moos, S. Hahn, F. L. Geyer, O. Tverskoy, J. Han, C. Lambert, A. Dreuw, T. B. Marder, and U. H. F. Bunz
  
• Rbdl: an efficient rigid-body dynamics library using recursive algorithms. Autonomous Robots, 41(2):495–511, 2017
  M. L. Felis
  
• Self-supervised learning of pose embeddings from spatiotemporal relations in videos. In Proceedings of the IEEE International Conference on Computer Vision (ICCV), pages 4308–4317, 2017
  Ö. Sümer, T. Dencker, and B. Ommer
  
• System testing in scientific numerical software frameworks using the example of dune. Archive of Numerical Software, 5(1):151–168, 2017
  D. Kempf and T. Koch
  
• Time-resolved measurement of interatomic coulombic decay induced by to-photon double excitation of ne2. Physical Review Letters, 118 (2017)
  T. Takanashi, G. Jabbari, N. V. Golubev, L. S. Cederbaum, and A. I. Kuleff
  
• A phenomenological model of the time course of maximal voluntary isometric contraction force for optimization of complex loading schemes. European Journal of Applied Physiology, 118(12):2587–2605, Dec 2018
  J. L. Herold, C. Kirches, and J. P. Schloeder
  
• A stable and high-order accurate discontinuous galerkin based splitting method for the incompressible navier–stokes equations. Journal of Computational Physics, 356:220 – 239, 2018
  M. Piatkowski, S. Müthing, and P. Bastian
  
• An Adaptive Newton Algorithm for Optimal Control Problems with Application to Optimal Electrode Design. Journal Of Optimization Theory and Applications, 177(2):498–534, May 2018
  T. Carraro, S. Dorsam, S. Frei, and D. Schwarz
  
• Augmented Reality Meets Computer Vision: Efficient Data Generation for Urban Driving Scenes. International Journal Of Computer Vision, 126(9, Si):961–972, Sep 2018
  H. Abu Alhaija, S. K. Mustikovela, L. Mescheder, A. Geiger, and C. Rother
  
• Computational design of a molecular triple photoswitch for wavelength-selective control. Chemical Science, 9(46):8665–8672, Dec 14 2018
  C. Yang, C. Slavov, H. A. Wegner, J. Wachtveitl, and A. Dreuw
  
• Cytoplasmic flows in starfish oocytes are fully determined by cortical contractions. PLoS Computational Biology, 14(2018, 2018
  N. Klughammer, N. D. Schnellbächer, and U. S. Schwarz
  
• Deciphering 3d organization of chromosomes using hi-c data. In R. T. Dame, editor, Bacterial chromatin, pages 389–401. Springer, New York, 2018
  A. Hofmann and D. W. Heermann
  
• Dunecomposites - A new framework for high-performance finite element modelling of laminates. Dune-Composites - A New Framework for High-Performance Finite Element Modelling of Laminates. Composite Structures, 184:269–278, Jan 15 2018
  A. Reinarz, T. Dodwell, T. Fletcher, L. Seelinger, R. Butler, and R. Scheichl
  
• Humanoid gait generation in complex environments based on template models and optimality principles learned from human beings. International Journal of Robotics Research, 37(10, Si):1184–1204, Sep 2018
  D. Clever, Y. Hu, and K. Mombaur
  
• On the relationship between the theory of cointegration and the theory of phase synchronization. Statistical Science, 33(3):334–357, 2018
  R. Dahlhaus, I. Z. Kiss, and J. C. Neddermeyer
  
• Punching Membranes: How Lipid Bilayers Withstand and Propagate Mechanical Load. Biophysical Journal, 114(3, 1):562a, Feb 2 2018. 62nd Annual Meeting of the Biophysical-Society, San Francisco, CA, Feb 17-21, 2018
  F. Franz, C. Aponte-Santamaria, S. Garcia-Manyes, and F. Graeter
  
• Renormalization group second-order approximation for singularly perturbed nonlinear ordinary differential equations. Mathematical Methods in the Applied Sciences, 41(14):5691–5710, Sep 30 2018
  A. Marciniak-Czochra, A. Mikelic, and T. Stiehl
  
• State and state of charge estimation for a latent heat storage. Control Engineering Practice, 72:151–166, Mar 2018
  T. Barz, D. Seliger, K. Marx, A. Sommer, S. F. Walter, H. G. Bock, and S. Koerkel
  
• Why rankings of biomedical image analysis competitions should be interpreted with care. Nature Communications, 9, Dec 6 2018
  L. Maier-Hein, M. Eisenmann, A. Reinke, S. Onogur, M. Stankovic, P. Scholz, T. Arbel, H. Bogunovic, A. P. Bradley, A. Carass, C. Feldmann, A. F. Frangi, P. M. Full, B. van Ginneken, A. Hanbury, K. Honauer, M. Kozubek, B. A. Landman, K. Marz, O. Maier, K. Maier- Hein, B. H. Menze, H. Muller, P. F. Neher, W. Niessen, N. Rajpoot, G. C. Sharp, K. Sirinukunwattana, S. Speidel, C. Stock, D. Stoyanov, A. A. Taha, F. Van der Sommen, C.-W. Wang, M.-A. Weber, G. Zheng, P. Jannin, and A. Kopp-Schneider
  
• Algebraic diagrammatic construction for the polarisation propagator in combination with effective fragment potentials. Physical Chemistry Chemical Physics, 21(7):3683–3694, Feb 21 2019
  R. Sen, A. Dreuw, and S. Faraji
  
• Magnetic Domains in Thin Ferromagnetic Films with Strong Perpendicular Anisotropy. Archive for Rational Mechanics and Analysis, 232(2):727–761, May 2019
  H. Knuepfer, C. B. Muratov, and F. Nolte
  
• Multi-temporal 3D point cloud-based quantification and analysis of geomorphological activity at an alpine rock glacier using airborne and terrestrial LiDAR. Permafrost and Periglacial Processes, 30(3):222–238, Jul 2019
  V. Zahs, M. Haemmerle, K. Anders, S. Hecht, R. Sailer, M. Rutzinger, J. G. Williams, and B. Hoefle
  
• On the contribution of chemical oscillations to ozone depletion events in the polar spring. Atmospheric Chemistry and Physics, 19(15):10161–10190, Aug 13 2019
  M. Herrmann, L. Cao, H. Sihler, U. Platt, and E. Gutheil
  
• Quantitative systems pharmacology of interferon alpha administration: A multi-scale approach. PLoS One, 14(2), Feb 13 2019
  P. Kalra, J. Brandl, T. Gaub, C. Niederalt, J. Lippert, S. Sahle, L. Kuepfer, and U. Kummer
  
• Quantum chemistry with coulomb sturmians. Physical Review, 99:14 S., 2019
  M. F. Herbst, J. E. Avery, and A. Dreuw
  
• Quiescence Modulates Stem Cell Maintenance and Regenerative Capacity in the Aging Brain. Cell, 176(6):1407+, Mar 7 2019
  G. Kalamakis, D. Bruene, S. Ravichandran, J. Bolz, W. Fan, F. Ziebell, T. Stiehl, F. Catala- Martinez, J. Kupke, S. Zhao, E. Llorens-Bobadilla, K. Bauer, S. Limpert, B. Berger, U. Christen, P. Schmezer, J. P. Mallm, B. Berninger, S. Anders, A. del Sol, A. Marciniak-Czochra, and A. Martin-Villalba
  
• Tailoring Ultrafast Singlet Fission by the Chemical Modification of Phenazinothiadiazoles. Journal of the American Chemical Society, 141(22):8834–8845, Jun 5 2019
  N. Alagna, J. Han, N. Wollscheid, J. L. P. Lustres, J. Herz, S. Hahn, S. Koser, F. Paulus, U. H. F. Bunz, A. Dreuw, T. Buckup, and M. Motzkus
  
• The accuracy of german citizens’ confidence in their climate change knowledge. Nature Climate Change, pages 776–780, 2019
  H. Fischer, D. Amelung, and N. Said
  
• Uncertainty-aware performance assessment of optical imaging modalities with invertible neural networks. International Journal of Computer Assisted Radiology and Surgery, 14(6, 1, SI):997–1007, Jun 2019. 10th International Conference on Information Processing for Computer-Assisted Interventions (IPCAI), France, Jun 18-19, 2019
  T. J. Adler, L. Ardizzone, A. Vemuri, L. Ayala, J. Groehl, T. Kirchner, S. Wirkert, J. Kruse, C. Rother, U. Koethe, and L. Maier-Hein