Project Details
SFB 1644: Phenotypic plasticity in plants – Mechanisms, constraints and evolution
Subject Area
Biology
Term
since 2024
Project identifier
Deutsche Forschungsgemeinschaft (DFG) - Project number 512328399
Plants have colonised almost every habitat on earth. They are the dominant organismal kingdom by biomass, and all animal life depends on them. A major feature that has enabled this success is the remarkable ability of plants to adjust their growth and development to different environments. The ability of a given genotype to generate different phenotypes in different environments is termed phenotypic plasticity. Such plasticity is a universal feature of life, and understanding its molecular basis and evolution is a fundamental goal in biology. This understanding has major implications for predicting plant responses to a changing climate and environment and for accelerating plant breeding tailored to specific environments. With our CRC, we propose an interdisciplinary research program to tackle this key challenge across multiple scales of biological organization. Genotypes can differ in how they respond to the same environmental cue, for example because of molecular differences in their environmental response machinery. Thus, the plasticity of a focal trait to an environmental cue is itself a heritable trait. At the same time, phenotypic plasticity is not unlimited, but is associated with costs and constraints. One important source of such constraints are genetic correlations between plastic responses of different traits. The magnitude and shape of plastic responses can be described by the reaction norm that relates the trait values of a given genotype to the values of the environmental cue. Previous work has both demonstrated ample variation in reaction-norm shapes, and elucidated the molecular mechanisms underlying plasticity to particular cues in model genotypes. However, these two fields of research are largely unconnected and we still know very little about what makes different genotypes respond differently to the same environmental cue? To address this overarching question, our CRC will tackle the following four common questions across the individual projects: (i) What is the genetic and molecular basis of variation in phenotypic plasticity of key traits to environmental cues in natural populations? (ii) How do the genes that influence the reaction-norm shape of a trait act mechanistically, and to what extent are these molecular mechanisms shared across taxa? (iii) Are there genetic correlations between the extents of phenotypic plasticity for different focal traits that constrain plasticity? (iv) Which type of natural selection acts on phenotypic plasticity of a focal trait, and is there evidence for recent positive selection on plasticity? To achieve these goals, our consortium will integrate genetics, cell and developmental biology, physiology, evolutionary biology, ecology, computational biology and mathematical modeling. As a result, we will obtain a step-change in our understanding of phenotypic plasticity as an evolving trait of critical importance to the fate of plant populations in the face of environmental change.
DFG Programme
Collaborative Research Centres
International Connection
USA
Current projects
- A01 - Organ-specificity of plastic responses to light quality and temperature (Project Head Kaufmann, Kerstin )
- A02 - Environmental plasticity of asexual endosperm formation in Arabidopsis (Project Head Figueiredo, Ph.D., Duarte )
- A03 - Phenotypic plasticity of cambial secondary growth in Brassicaceae in response to temperature and day length (Project Head Shi, Dongbo )
- A04 - Comparing developmental plasticity to warm temperature between Arabidopsis thaliana and Capsella (Project Head Wigge, Ph.D., Philip Anthony )
- A05 - Plasticity of leaf form and function in response to temperature in Capsella bursa-pastoris (Project Head Lenhard, Michael )
- A06 - Phenotypic plasticity of thermotolerance in close relatives within the genus Capsella (Project Head Bäurle, Isabel )
- A07 - Plasticity in thermal acclimation in selfing vs. outcrossing Capsella species (Project Head Tiedemann, Ph.D., Ralph )
- A08 - A comparative cellular atlas of environmental plasticity in leaves (Project Heads Kaufmann, Kerstin ; Ohler, Uwe ; Wigge, Ph.D., Philip Anthony )
- A09 - Plasticity of lipid metabolism in Arabidopsis thaliana exposed to different temperatures (Project Heads Correa, Sandra ; Fernie, Ph.D., Alisdair )
- A10 - Plasticity of epidermal cell shape complexity in Arabidopsis thaliana in response to temperature (Project Heads Nowak, Ph.D., Jacqueline ; Sampathkumar, Ph.D., Arun )
- B01 - Plasticity of root-hair density and patterning in Arabidopsis thaliana in response to resources (Project Heads Nowak, Ph.D., Jacqueline ; Sauer, Michael )
- B02 - Plasticity of secondary walls to water limitation in the vasculature of Arabidopsis thaliana (Project Head Schneider, Rene )
- B03 - Genomic and functional underpinning of reaction norms of the leaf-economic spectrum across environmental gradients (Project Heads Lenhard, Michael ; Linstädter, Anja )
- B04 - Plasticity of photorespiratory activity in Arabidopsis thaliana in response to nitrogen (Project Heads Fernie, Ph.D., Alisdair ; Nikoloski, Ph.D., Zoran )
- B05 - Predicting reaction norms of enzyme and metabolite concentrations in Arabidopsis thaliana exposed to different nitrogen availability and temperature regimes (Project Head Nikoloski, Ph.D., Zoran )
- B06 - Plasticity of the Calvin-Benson cycle in Arabidopsis in response to changing light and nitrogen availability over a diurnal cycle (Project Head Küken, Anika )
- B07 - Phenotypic plasticity of the diurnal pattern of starch metabolism in response to a fluctuating environment in Arabidopsis thaliana (Project Heads Fettke, Joerg ; Töpfer, Nadine )
- Z01 - Central Tasks of the Collaborative Research Centre (Project Head Lenhard, Michael )
- Z02 - Data management, synthesis, and integration (Project Heads Lippert, Christoph ; Nikoloski, Ph.D., Zoran )
Applicant Institution
Universität Potsdam
Participating Institution
Hasso-Plattner-Institut für Digital Engineering
HPI Digital Health Center; Leibniz-Institut für Gemüse- und Zierpflanzenbau (IGZ) e.V.; Max-Planck-Institut für molekulare Pflanzenphysiologie (MPI-MP)
HPI Digital Health Center; Leibniz-Institut für Gemüse- und Zierpflanzenbau (IGZ) e.V.; Max-Planck-Institut für molekulare Pflanzenphysiologie (MPI-MP)
Participating University
Humboldt-Universität zu Berlin; Universität zu Köln
Spokesperson
Professor Dr. Michael Lenhard