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Institution
Universität Leipzig
Institut für Informatik
Lehrstuhl für Bioinformatik
Address
Härtelstraße 16-18
04107 Leipzig
Deutschland
GERiT
This institution in GERiT
04107 Leipzig
Projects
Priority Programmes
Current projects
Evolution of epigenetic regulation in beetles (Coleoptera)
(Applicants
Kurtz, Joachim
;
Prohaska, Sonja
)
Prevalence, formation, and function of “extraneous” CRISPR RNAs derived from the extra repeat in CRISPR arrays
(Applicants
Beisel, Chase
;
Weinberg, Ph.D., Zasha
)
Synteny-Based Identification of Genomic Innovations in Insects
(Applicants
Lemke, Steffen
;
Stadler, Peter Florian
)
Virtual Drug Screening in the Chemical Space Accessible by Chemical Synthesis
(Applicants
Meiler, Jens
;
Stadler, Peter Florian
)
Completed projects
Computational Detection of Bacterial ncRNAs and their Targets
(Applicants
Backofen, Rolf
;
Stadler, Peter Florian
)
Evolution of Chemical Modifications: from tRNAs to Transcriptome-Wide Surveys
(Applicants
Mörl, Mario
;
Stadler, Peter Florian
)
Genotype-Phenotype Maps and Signatures of Selection in Genomic Sequences
(Applicant
Stadler, Peter Florian
)
Improving prediction and detection of small proteins for functional analysis in a consortium resembling the functions of the human microbiome
(Applicants
von Bergen, Martin
;
Stadler, Peter Florian
)
Long Non-Coding RNAs in Primate Brain Evolution
(Applicants
Nowick, Katja
;
Stadler, Peter Florian
)
Molecular Morphology: Deep Phylogeny Using RNA Structures and Related Markers
(Applicant
Stadler, Peter Florian
)
Refined Methods for Inference of Metazoan Phylogeny Using Mitochondrial Genome Arrangement Data
(Applicant
Schierwater, Bernd
)
Refined Methods for Inference of Metazoan Phylogeny Using Mitochondrial Genome Arrangement Data
(Applicants
Schierwater, Bernd
;
Stadler, Peter Florian
)
Research Grants
Current projects
Analysis of the Cancer Imprintome and its Associated Long Non-Coding RNAs
(Applicant
Stadler, Peter Florian
)
Automatic reduction of false positive rates for RNA similarity searches in huge datasets
(Applicant
Weinberg, Ph.D., Zasha
)
CCA-adding enzymes with increased substrate affinities: strategies and consequences for adaptation to RNA substrates
(Applicants
Mörl, Mario
;
Prohaska, Sonja
)
High-throughput structure probing of RNA based on specific ligation of cyclo-phosphate ends combined with deep sequencing
(Applicants
Mörl, Mario
;
Stadler, Peter Florian
)
Identification and characterization of new structured RNA classes in plants
(Applicants
Wachter, Ph.D., Andreas
;
Weinberg, Ph.D., Zasha
)
Miniaturized armless tRNAs – function, interaction, modifications
(Applicants
Mörl, Mario
;
Stadler, Peter Florian
)
Precise Methods for Orthology Assessment in Large Data Sets Using Best Matches
(Applicant
Stadler, Peter Florian
)
RNA-seq-based screening for active self-cleaving ribozymes and transcriptome-wide assessment of their regulatory functions
(Applicants
Fallmann, Ph.D., Jörg
;
Weinberg, Christina E.
)
Completed projects
Algorithms for Reconstructing Evolutionary Relationships between Phylogenies: The Multi-Valued Case
(Applicants
Middendorf, Martin
;
Stadler, Peter Florian
)
Approximate Graph Products
(Applicant
Stadler, Peter Florian
)
COIL-seq: Dissecting Cyanobacterial Chromosome Dynamics
(Applicants
Axmann, Ilka Maria
;
Stadler, Peter Florian
)
Computational Methods for a Large Scale Annotation of Mitochondrial Genome
(Applicant
Middendorf, Martin
)
Funktionelle und strukturelle Konservierung ausgewählter Chromatingene in Insekten
(Applicant
Sass, Heinz G.
)
Geometric representations and symmetries of graphs, maps and other discrete structures and applications in science
(Applicant
Stadler, Peter Florian
)
Synthetic riboswitches: design of multi-ligand switches and novel regulatory principle
(Applicants
Mörl, Mario
;
Stadler, Peter Florian
)
Unusual RNA-polymerases: reaction mechanism and substrate specificity of tRNA nucleotidyltransferases
(Applicants
Mörl, Mario
;
Prohaska, Sonja
)
Usage of relative timing of intron gain for phylogenetic analysis
(Applicants
Krauß, Veiko
;
Stadler, Peter Florian
)
Collaborative Research Centres
Current projects
Bioinformatic support for the CRC
(Project Head
Stadler, Peter Florian
)
Data management and computational models of structure and dynamics, and evolution of GPCRs
(Project Heads
Hildebrand, Peter
;
Meiler, Jens
;
Stadler, Peter Florian
)
Specificity and dynamics in signaling of peptide activated GPCRs
(Project Heads
Hildebrand, Peter
;
Stadler, Peter Florian
)
Research Training Groups
Completed projects
GRK 446: Knowledge Representation
(Spokesperson
Brewka, Gerhard
)
Additional Information
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