Project Details
SFB 1340: In vivo Visualization of Extracellular Matrix Pathology „Matrix in Vision“
Subject Area
Medicine
Biology
Chemistry
Biology
Chemistry
Term
since 2018
Website
Homepage
Project identifier
Deutsche Forschungsgemeinschaft (DFG) - Project number 372486779
All biological tissues react to inflammation, injury, or tumor invasion by an adaptive response of the local extracellular matrix (ECM) with a loss of equilibrium. This process is known as ECM remodeling and involves changes in the biochemical composition, architecture, and physicomechanical properties. Quantitative and qualitative modification of matrix proteins, proteoglycans, and glycosaminoglycans (GAGs) begins in the early phase of disease development and continues with disease progression. Because of the fundamental quantitative and qualitative changes the ECM components undergo in diseased tissue, the ECM has attracted our interest as an vivo imaging target for the detection, characterization, and monitoring of disease. During the first funding period CRC „Matrix in Vision“ confirmed this using models of atherosclerosis, aortic aneurysm, uremic cardiomyopathy, multiple sclerosis, inflammatory conditions of the bowel and liver, and peritumoral inflammation using methods of molecular and biophysical ex vivo and in vivo MR imaging. During the second funding period, the aims are to investigate how the methods of in vivo imaging established so far are suitable to detect treatment responses in established disease models and what information imaging can provide on ECM composition and its changes during treatment. To this end, the CRC will further advance physical and biochemical analytical techniques including element microscopy. A central aim is to analyze interactions between molecular imaging probes (gadolinium (Gd)-based nonspecific and specific contrast agents, iron oxide nanoparticles) and ECM components. The focus here is on GAGs, which are an important target because they can form complexes with positively charged imaging probes or their positively charged components. The expected insights into mechanisms underlying the enhancement of inflammatory tissue in MR imaging using clinically approved Gd-based imaging probes will affect the interpretation of clinical contrast-enhanced MRI. Imaging studies will include multiscale quantification of mechanical structural elements of the ECM, ranging from microscopic protein and GAG networks to macroscopic mechanical parameters investigated by clinical diagnostic elastography. The results will also translate into immediate clinical applications.In this way, CRC 1340 for the first time combines biological molecular methods in radiology with new insights into the role of mechanical tissue parameters in the development of disease and the monitoring of treatment responses. Also for the first time, CRC 1340 will thus enable the investigation of relationships of ECM structure and signal generation in molecular and biophysical medical imaging towards the development of new imaging approaches allowing quantitative, disease-specific diagnosis in radiology.
DFG Programme
Collaborative Research Centres
Current projects
- A01 - Multiscale Elastography for Characterization of Pathologic Extracellular Matrix Changes (Project Heads Braun, Jürgen ; Hennemuth, Anja ; Sack, Ingolf )
- A02 - Magnetic Particle Imaging of the Extracellular Matrix (Project Heads Taupitz, Matthias ; Trahms, Lutz ; Wiekhorst, Frank )
- A03 - Electron Paramagnetic Resonance to Investigate Gadolinium-Glycosaminoglycan Complexes (Project Heads Bittl, Robert ; Teutloff, Christian )
- A04 - X-Ray Microscopy and Spectroscopy for Speciation of the Chemical Environment of Metal-Based Imaging Probes (Project Heads Kanngießer, Birgit ; Seim, Christian )
- A05 - Unraveling the Structures of Glycosaminoglycans and their Binding Characteristics with Cationic Imaging Probes (Project Head Pagel, Kevin )
- A06 - Development of Glycosaminoglycan-Targeting Antibodies to Unravel ECM Remodeling in Atopic Diseases (Project Heads Hedtrich, Sarah ; Seeberger, Peter H. ; Tauber, Rudolf )
- A07 - Multiscalar Machine Learning for the Integration of Quantitative in vivo MRI with ex vivo Analysis to assess Pathological Changes of the Extracellular Matrix (Project Heads Makowski, Marcus R. ; Rückert, Ph.D., Daniel )
- B01 - Characterization of the Extracellular Matrix of the Aortic Wall during the Development of Aneurysms Using Molecular and Biophysical MRI (Project Heads Adams, Lisa ; Brangsch, Julia ; Hamm, Bernd ; Kader, Avan ; Makowski, Marcus R. )
- B02 - Proteoglycans and Glycosaminoglycans as Targets for Noninvasive Imaging of Unstable Atherosclerotic Plaques (Project Heads Ludwig, Antje ; Poller, Ph.D., Wolfram Christian ; Schaafs, Lars-Arne ; Stangl, Verena )
- B03 - Targeting Extracellular Matrix Changes Induced by an Altered Homeostasis of Phosphate Metabolism (Project Heads Schnorr, Jörg ; Taupitz, Matthias )
- B05 - Investigation of Extracellular Matrix Alterations in Murine Models of Multiple Sclerosis by Molecular and Biophysical MRI (Project Heads Infante Duarte, Carmen ; Sack, Ingolf )
- B06 - Inflammatory Activity and Targeting of the Extracellular Matrix in Inflammatory Bowel Diseases (Project Heads Kühl, Anja A. ; Siegmund, Britta )
- B07 - The Extracellular Matrix as Target for Biophysical and Molecular Imaging of Inflammation and Fibrosis of the Liver (Project Heads Asbach, Patrick ; Braun, Jürgen ; Geisel, Dominik ; Tzschätzsch, Heiko )
- B08 - Full Mechanical and Extra Cellular Matrix Profile of the Cancerous Liver during Tumor Progression and after Treatment with Novel theranostic XTEN Fusion Proteins (Project Heads Guo, Jing ; Savic, Lynn Jeanette ; Schellenberger, Eyk )
- C01 - Central Project for Synthesis, Analysis, and Quality Control of Imaging Probes and for Histology (Project Heads Schnorr, Jörg ; Taupitz, Matthias )
- C02 - Central Project for Biochemical Analysis of Proteoglycans and Glycosaminoglycans and for Element-Specific Microscopy (Project Heads Pagel, Kevin ; Traub, Heike )
- C03 - Central Project for Quantitative Biomedical Imaging (Project Heads Sack, Ingolf ; Schäffter, Tobias )
- C04 - Central Project for Administration and Project Management (Project Heads Hamm, Bernd ; Taupitz, Matthias )
- INF - Project for Collaborative and Sustainable Research Data Management, Analysis and Visualisation (Project Heads Braun, Jürgen ; Braune, Katarina ; Penzkofer, Tobias ; Prasser, Fabian )
Applicant Institution
shared FU Berlin and HU Berlin through:
Charité - Universitätsmedizin Berlin
Charité - Universitätsmedizin Berlin
Co-Applicant Institution
Freie Universität Berlin; Humboldt-Universität zu Berlin
Participating University
Technische Universität Berlin; Technische Universität München (TUM)
Participating Institution
Bundesanstalt für Materialforschung und -prüfung (BAM)
Abteilung I: Analytische Chemie, Referenzmaterialien
Fachbereich 1.1: Anorganische Spurenanalytik; Max-Planck-Institut für Kolloid- und Grenzflächenforschung
Wissenschaftspark Potsdam-Golm; Physikalisch-Technische Bundesanstalt (PTB)
Standort Berlin
Abteilung I: Analytische Chemie, Referenzmaterialien
Fachbereich 1.1: Anorganische Spurenanalytik; Max-Planck-Institut für Kolloid- und Grenzflächenforschung
Wissenschaftspark Potsdam-Golm; Physikalisch-Technische Bundesanstalt (PTB)
Standort Berlin
Spokespersons
Professor Dr. Bernd Hamm, until 6/2024; Professor Dr. Matthias Taupitz, since 7/2024